HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:391.4 nTPM
HPA Brain:523.4 nTPM
GTEx:391.4 nTPM
FANTOM5:386.8 Scaled Tags Per Million
Pig:467.0 nTPM
Mouse:1117.3 nTPM
Allen mouse:25.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043640Antibody HPA046280Antibody CAB015339
Glial cells Not detectedNot detectedHigh
Neuronal cells LowMediumHigh






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 523.4
Sample id Sample description nTPM
Hippocampus
nTPM: 338.7
1898 Male, age 80, left hemisphere 551.0
2529 Female, age 94, left hemisphere 351.7
2621 Female, age 67, right hemisphere 323.2
2148 Female, age 91, left hemisphere 304.5
1855 Male, age 76, left hemisphere 272.1
1911 Female, age 85, right hemisphere 229.5
Dentate gyrus
nTPM: 375.3
1927 Female, age 91, both hemispheres 459.7
2530 Female, age 94, left hemisphere 431.8
2010 Male, age 76, both hemispheres 361.3
2246 Female, age 85, both hemispheres 360.3
2528 Male, age 74, both hemispheres 349.3
2531 Female, age 67, both hemispheres 289.4
Entorhinal gyrus
nTPM: 407.7
2764 Male, age 80, right hemisphere 678.3
1938 Female, age 85, left hemisphere 471.6
2613 Female, age 94, left hemisphere 422.2
1787 Male, age 76, left hemisphere 377.2
2117 Female, age 91, right hemisphere 261.6
2686 Male, age 75, right hemisphere 235.0
Hippocampus, CA1
nTPM: 458.7
2749 Male, age 80, left hemisphere 874.5
2527 Male, age 74, both hemispheres 457.8
1873 Female, age 85, both hemispheres 378.4
2082 Female, age 91, right hemisphere 313.7
2045 Male, age 76, both hemispheres 269.3
Hippocampus, CA2
nTPM: 372.7
1963 Male, age 80, left hemisphere 555.0
2249 Male, age 74, both hemispheres 394.2
2437 Female, age 94, left hemisphere 373.2
1892 Male, age 76, both hemispheres 366.5
2113 Female, age 91, right hemisphere 290.0
1940 Female, age 85, left hemisphere 257.4
Hippocampus, CA3
nTPM: 335.5
2137 Male, age 80, left hemisphere 555.0
2436 Male, age 74, both hemispheres 362.0
1867 Male, age 76, both hemispheres 314.0
2861 Female, age 67, both hemispheres 293.0
1891 Female, age 85, both hemispheres 250.0
2620 Female, age 94, left hemisphere 238.8
Parahippocampal cortex
nTPM: 421.0
2245 Female, age 91, both hemispheres 596.5
1850 Male, age 80, both hemispheres 512.2
1990 Female, age 91, right hemisphere 508.0
1933 Female, age 85, both hemispheres 501.1
2250 Female, age 67, right hemisphere 460.5
2532 Female, age 72, left hemisphere 451.3
2693 Female, age 94, both hemispheres 321.5
2622 Female, age 67, right hemisphere 319.9
2018 Male, age 76, both hemispheres 286.5
2692 Male, age 74, both hemispheres 252.5
Perirhinal gyrus
nTPM: 523.4
1847 Female, age 91, left hemisphere 774.0
2521 Female, age 94, right hemisphere 546.1
1794 Male, age 80, right hemisphere 532.0
1841 Female, age 85, right hemisphere 426.3
2848 Male, age 76, right hemisphere 338.6
Subiculum
nTPM: 311.8
1977 Female, age 85, both hemispheres 480.5
1901 Male, age 80, both hemispheres 370.2
2619 Male, age 74, both hemispheres 313.6
2438 Female, age 94, left hemisphere 295.6
2042 Male, age 76, both hemispheres 208.7
2729 Female, age 91, right hemisphere 201.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 391.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 391.4
Samples: 197

Max nTPM: 1407.4
Min nTPM: 32.0
Std nTPM: 255.2
Median nTPM: 339.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 1407.4
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 1256.4
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 1151.7
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 1073.5
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 1047.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 991.8
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 915.0
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 912.3
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 831.6
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 817.5
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 798.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 386.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 386.8
FF:10169-103B7 60 years, female 497.4
FF:10153-102I9 76 years, female 276.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 467.0
Pig sample Sample description nTPM
Subiculum
nTPM: 467.0
Samples: 4

Max nTPM: 681.7
Min nTPM: 371.5
Sample A Female 681.7
Sample B Female 416.6
Sample C Male 371.5
Sample D Male 398.2
Dorsal hippocampus
nTPM: 463.9
Samples: 4

Max nTPM: 722.1
Min nTPM: 303.3
Sample A Female 722.1
Sample B Female 484.5
Sample C Male 303.3
Sample D Male 345.8
Entorhinal cortex
nTPM: 448.0
Samples: 4

Max nTPM: 555.1
Min nTPM: 399.1
Sample A Female 555.1
Sample B Female 417.1
Sample C Male 420.7
Sample D Male 399.1
Ventral hippocampus
nTPM: 437.8
Samples: 4

Max nTPM: 543.2
Min nTPM: 307.0
Sample A Female 543.2
Sample B Female 307.0
Sample C Male 481.4
Sample D Male 419.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1117.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 926.5
Samples: 4

Max nTPM: 1135.8
Min nTPM: 754.3
Sample A Male 754.3
Sample B Male 842.7
Sample C Female 973.0
Sample D Female 1135.8
Hippocampal formation
nTPM: 1117.3
Samples: 4

Max nTPM: 1150.4
Min nTPM: 1091.3
Sample A Male 1104.7
Sample B Male 1091.3
Sample C Female 1122.7
Sample D Female 1150.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 25.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 25.6
74819689 Antisense, RP_060315_02_H05, Mouse strain C57BL/6J (56 days, male) 27.0
69854163 Antisense, RP_050324_04_C01, Mouse strain C57BL/6J (56 days, male) 25.4
69838608 Antisense, RP_050310_02_C05, Mouse strain C57BL/6J (56 days, male) 24.5

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