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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
726.6
nTPM
FANTOM5:
848.5
Scaled Tags Per Million
Pig:
512.1
nTPM
Allen mouse:
20.4
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
726.6
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 259.8
1984
Male, age 76, both hemispheres
333.0
2301
Female, age 85, both hemispheres
283.1
2188
Female, age 91, both hemispheres
225.1
2090
Male, age 80, both hemispheres
198.2
Dorsal cochlear nucleus nTPM: 215.8
2058
Male, age 76, both hemispheres
302.2
2187
Female, age 91, both hemispheres
289.7
2370
Male, age 61, both hemispheres
221.2
2378
Male, age 80, both hemispheres
133.0
2802
Male, age 74, right hemisphere
132.8
Dorsal tegmental nucleus nTPM: 290.1
2083
Male, age 80, both hemispheres
354.1
2358
Male, age 61, both hemispheres
312.9
1936
Male, age 76, left hemisphere
259.7
2326
Male, age 74, both hemispheres
233.7
Dorsolateral tegmental area nTPM: 268.5
2141
Male, age 76, both hemispheres
321.5
2654
Male, age 80, both hemispheres
296.9
2751
Female, age 85, both hemispheres
283.1
2360
Male, age 74, both hemispheres
274.0
2337
Male, age 61, both hemispheres
167.0
Kolliker-Fuse nucleus nTPM: 355.4
2163
Male, age 80, both hemispheres
536.4
2315
Male, age 76, right hemisphere
280.3
2793
Female, age 91, left hemisphere
249.5
Lateral lemniscal nuclei nTPM: 474.9
2169
Male, age 76, both hemispheres
609.5
2453
Male, age 74, right hemisphere
557.5
2036
Male, age 80, both hemispheres
490.2
2746
Female, age 85, left hemisphere
399.9
2320
Female, age 91, left hemisphere
317.2
Lateral parabrachial nucleus nTPM: 314.5
2139
Female, age 85, right hemisphere
531.1
2013
Male, age 80, both hemispheres
299.2
2790
Male, age 61, both hemispheres
294.9
2792
Male, age 76, both hemispheres
132.8
Lateral vestibular nucleus nTPM: 348.4
2184
Male, age 76, both hemispheres
464.9
2311
Male, age 80, both hemispheres
231.9
Locus coeruleus nTPM: 726.6
2123
Female, age 91, both hemispheres
1111.3
2720
Male, age 74, both hemispheres
945.1
2014
Male, age 55, unknown
726.8
1980
Male, age 76, both hemispheres
622.7
2317
Female, age 72, unknown
608.5
2162
Male, age 80, both hemispheres
598.0
2788
Male, age 74, unknown
473.6
Medial parabrachial nucleus nTPM: 317.5
2156
Male, age 61, both hemispheres
392.9
2170
Female, age 91, both hemispheres
348.4
2854
Male, age 80, both hemispheres
318.7
2786
Male, age 76, both hemispheres
268.8
2463
Female, age 85, right hemisphere
258.6
Medial periolivary nuclei nTPM: 440.5
2063
Male, age 76, both hemispheres
711.9
2171
Female, age 85, both hemispheres
604.8
2791
Male, age 74, right hemisphere
345.9
2081
Male, age 80, both hemispheres
293.0
2458
Female, age 91, both hemispheres
246.9
Motor facial nucleus nTPM: 452.4
2062
Male, age 76, both hemispheres
781.7
2327
Male, age 80, both hemispheres
541.4
2365
Male, age 74, right hemisphere
485.1
2697
Female, age 85, both hemispheres
336.2
2126
Male, age 61, both hemispheres
334.1
2795
Female, age 91, both hemispheres
236.2
Motor trigeminal nucleus nTPM: 339.1
2079
Male, age 80, both hemispheres
548.7
2560
Male, age 74, both hemispheres
316.8
2335
Male, age 61, both hemispheres
309.2
2321
Female, age 91, both hemispheres
263.3
2309
Male, age 76, both hemispheres
257.6
Nuclei of the trapezoid body nTPM: 611.0
2159
Male, age 61, both hemispheres
920.6
1983
Male, age 76, both hemispheres
720.1
2735
Female, age 85, both hemispheres
676.3
2166
Male, age 80, both hemispheres
458.6
2368
Female, age 91, both hemispheres
279.1
Nucleus raphe magnus nTPM: 619.4
2160
Male, age 61, both hemispheres
882.7
2455
Male, age 74, both hemispheres
881.7
2172
Female, age 85, both hemispheres
697.1
2328
Male, age 80, both hemispheres
531.4
2051
Male, age 76, both hemispheres
429.3
2459
Female, age 91, both hemispheres
294.3
Paramedian reticular nucleus nTPM: 446.2
2057
Male, age 80, both hemispheres
586.1
2313
Male, age 61, both hemispheres
521.4
2050
Female, age 85, both hemispheres
484.5
2052
Male, age 76, both hemispheres
192.7
Pedunculopontine tegmental nucleus nTPM: 347.3
2334
Male, age 80, both hemispheres
387.5
1921
Female, age 85, both hemispheres
361.8
2338
Male, age 61, both hemispheres
292.5
Pontine nuclei nTPM: 545.5
1863
Male, age 55, unknown
749.3
2787
Female, age 85, both hemispheres
716.7
2727
Male, age 61, right hemisphere
685.0
2109
Female, age 72, unknown
607.2
1968
Male, age 76, left hemisphere
599.9
2454
Male, age 74, left hemisphere
407.7
2115
Male, age 80, left hemisphere
363.8
2319
Female, age 91, both hemispheres
234.7
Pontine raphe nucleus nTPM: 459.8
2122
Female, age 85, midline
574.4
2853
Male, age 76, midline
345.1
Posteroventral cochlear nucleus nTPM: 231.2
2752
Female, age 85, both hemispheres
441.9
2070
Male, age 76, both hemispheres
369.3
2371
Male, age 61, both hemispheres
189.6
2341
Male, age 80, both hemispheres
96.6
2135
Female, age 91, both hemispheres
58.4
Principal sensory trigeminal nucleus nTPM: 508.1
2158
Male, age 61, both hemispheres
854.7
2008
Male, age 80, left hemisphere
538.6
2324
Male, age 76, both hemispheres
384.2
2367
Female, age 91, left hemisphere
255.1
Reticular pontine nucleus, caudal nTPM: 392.0
2332
Male, age 80, right hemisphere
604.1
2092
Male, age 76, both hemispheres
488.9
2457
Female, age 91, both hemispheres
259.4
2559
Male, age 74, both hemispheres
215.6
Reticular pontine nucleus, oral nTPM: 361.4
2361
Male, age 74, both hemispheres
575.6
2012
Female, age 85, both hemispheres
443.2
1939
Male, age 80, both hemispheres
303.3
2167
Male, age 76, both hemispheres
263.2
2366
Female, age 91, both hemispheres
221.8
Reticulotegmental nucleus nTPM: 373.0
2325
Male, age 76, both hemispheres
496.2
2452
Male, age 74, both hemispheres
362.4
2333
Male, age 80, both hemispheres
346.2
2322
Female, age 91, both hemispheres
287.3
Spinal trigeminal nucleus, oral nTPM: 384.9
2164
Male, age 80, both hemispheres
430.2
2737
Female, age 85, both hemispheres
426.2
1978
Male, age 76, both hemispheres
298.2
Subcoeruleus area nTPM: 373.0
2323
Female, age 91, left hemisphere
498.4
2089
Male, age 76, left hemisphere
486.3
1958
Male, age 80, both hemispheres
397.4
2451
Male, age 74, both hemispheres
286.5
2369
Female, age 85, left hemisphere
196.5
Superior olive nTPM: 440.5
1875
Female, age 85, both hemispheres
512.8
2364
Male, age 74, right hemisphere
484.2
2329
Male, age 80, right hemisphere
471.4
2020
Male, age 76, both hemispheres
435.4
2561
Female, age 91, both hemispheres
298.6
Ventral periolivary nuclei nTPM: 494.2
2165
Male, age 80, both hemispheres
639.3
2130
Female, age 85, both hemispheres
636.1
2023
Male, age 76, both hemispheres
377.4
2794
Female, age 91, left hemisphere
324.0
Ventrolateral tegmental area, A5 NE cell group nTPM: 396.1
2449
Male, age 74, both hemispheres
637.5
1959
Male, age 76, both hemispheres
451.2
2161
Male, age 80, both hemispheres
423.8
2359
Male, age 61, both hemispheres
351.9
2840
Female, age 85, both hemispheres
318.1
2456
Female, age 91, both hemispheres
194.1
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
512.1
Pig sample
Sample description
nTPM
Pons nTPM: 512.1
Samples: 4
Max nTPM: 724.3
Min nTPM: 420.2
Sample A
Female
724.3
Sample B
Female
420.2
Sample C
Male
433.5
Sample D
Male
470.5
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
