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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
11.1
nTPM
HPA Brain:
39.0
nTPM
GTEx:
11.1
nTPM
FANTOM5:
56.9
Scaled Tags Per Million
Pig:
11.9
nTPM
Mouse:
17.0
nTPM
Allen mouse:
3.6
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max nTPM
39.0
Sample id
Sample description
nTPM
Amygdala nTPM: 39.0
1987
Female, age 91, left hemisphere
46.7
2517
Female, age 94, left hemisphere
40.4
2514
Male, age 75, right hemisphere
39.8
2695
Female, age 67, right hemisphere
37.7
2814
Male, age 76, right hemisphere
30.6
Basal amygdala nTPM: 29.4
2609
Male, age 75, right hemisphere
43.7
2243
Female, age 91, right hemisphere
31.4
2110
Male, age 80, left hemisphere
30.2
1955
Male, age 76, both hemispheres
28.8
2685
Female, age 94, left hemisphere
22.3
2827
Female, age 67, right hemisphere
19.8
Central amygdala nTPM: 33.2
2515
Male, age 75, right hemisphere
46.0
1905
Male, age 76, both hemispheres
32.1
2826
Female, age 94, left hemisphere
30.1
2239
Male, age 80, left hemisphere
29.6
2701
Female, age 91, right hemisphere
28.0
Corticomedial amygdala nTPM: 30.5
2428
Male, age 75, right hemisphere
41.3
2242
Female, age 91, right hemisphere
38.2
2829
Male, age 80, left hemisphere
30.5
2240
Male, age 76, both hemispheres
29.5
2429
Female, age 94, left hemisphere
25.0
2535
Female, age 67, right hemisphere
18.7
Lateral amygdala nTPM: 30.2
2516
Male, age 75, right hemisphere
39.5
2256
Male, age 80, left hemisphere
33.6
2255
Female, age 91, right hemisphere
29.5
1883
Male, age 76, both hemispheres
27.9
2534
Female, age 94, left hemisphere
26.5
2830
Female, age 67, right hemisphere
24.1
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
11.1
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 11.1
Samples: 152
Max nTPM: 27.6
Min nTPM: 2.2
Std nTPM: 4.5
Median nTPM: 10.1
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
27.6
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
26.7
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
25.8
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
25.5
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
20.5
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
19.8
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
19.6
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
18.5
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
18.1
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
17.9
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
17.8
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
17.7
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
17.5
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
17.4
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
17.2
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
17.1
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
17.1
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
16.9
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
16.9
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
16.9
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
16.7
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
16.2
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
15.9
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
15.3
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
15.1
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
15.1
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
15.0
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
15.0
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
14.9
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
14.9
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
14.7
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
14.6
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
14.1
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
14.0
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
13.9
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
13.8
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
13.5
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
13.4
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
13.3
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
13.2
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
13.2
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
13.1
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
12.9
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
12.9
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
12.9
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
12.8
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
12.8
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
12.7
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
12.6
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
12.5
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
12.4
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
12.3
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
12.1
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
12.1
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
12.0
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
11.9
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
11.8
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
11.7
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
11.6
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
11.5
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
11.4
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
11.0
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
10.9
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
10.9
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
10.7
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
10.6
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
10.6
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
10.6
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
10.6
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
10.4
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
10.4
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
10.3
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
10.3
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
10.2
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
10.1
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
10.1
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
10.1
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
10.1
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
10.0
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
10.0
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
9.9
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
9.8
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
9.8
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
9.8
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
9.7
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
9.7
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
9.7
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
9.7
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
9.6
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
9.6
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
9.5
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
9.5
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
9.4
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
9.3
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
9.2
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
9.2
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
9.2
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
9.1
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
9.1
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
9.0
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
9.0
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
9.0
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
8.9
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
8.8
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
8.7
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
8.6
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
8.6
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
8.5
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
8.5
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
8.4
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
8.4
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
8.4
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
8.3
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
8.2
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
8.2
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
8.0
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
7.7
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
7.6
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
7.4
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
7.3
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
7.2
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
7.2
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
7.0
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
7.0
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
6.9
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
6.7
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
6.7
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
6.6
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
6.6
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
6.3
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
6.3
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
6.2
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
6.1
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
6.1
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
6.0
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
5.9
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
5.9
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
5.8
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
5.8
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
5.8
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
5.5
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
5.5
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
5.4
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
5.3
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
5.2
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
4.8
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
4.7
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
4.5
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
4.4
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
4.4
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
4.3
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
2.2
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
17.0
Mouse sample
Sample description
nTPM
Amygdala nTPM: 17.0
Samples: 4
Max nTPM: 18.8
Min nTPM: 14.7
Sample A
Male
16.8
Sample B
Male
18.8
Sample C
Female
14.7
Sample D
Female
17.8
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.