HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:26.2 nTPM
HPA Brain:57.2 nTPM
GTEx:26.2 nTPM
FANTOM5:125.8 Scaled Tags Per Million
Pig:69.7 nTPM
Mouse:57.9 nTPM
Allen mouse:1.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA000263Antibody HPA000763Antibody CAB037312
Glial cells HighNot detectedNot detected
Neuronal cells MediumNot detectedNot detected







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 57.2
Sample id Sample description nTPM
Hippocampus
nTPM: 52.3
2529 Female, age 94, left hemisphere 64.7
1911 Female, age 85, right hemisphere 61.0
1898 Male, age 80, left hemisphere 57.0
1855 Male, age 76, left hemisphere 50.6
2148 Female, age 91, left hemisphere 43.6
2621 Female, age 67, right hemisphere 37.0
Dentate gyrus
nTPM: 47.4
2530 Female, age 94, left hemisphere 63.3
2010 Male, age 76, both hemispheres 58.1
2528 Male, age 74, both hemispheres 55.3
2246 Female, age 85, both hemispheres 40.8
1927 Female, age 91, both hemispheres 35.7
2531 Female, age 67, both hemispheres 31.1
Entorhinal gyrus
nTPM: 42.8
2117 Female, age 91, right hemisphere 65.9
1938 Female, age 85, left hemisphere 46.3
2686 Male, age 75, right hemisphere 40.6
2764 Male, age 80, right hemisphere 39.5
1787 Male, age 76, left hemisphere 33.9
2613 Female, age 94, left hemisphere 30.5
Hippocampus, CA1
nTPM: 43.5
1873 Female, age 85, both hemispheres 55.2
2527 Male, age 74, both hemispheres 53.3
2082 Female, age 91, right hemisphere 44.6
2749 Male, age 80, left hemisphere 33.9
2045 Male, age 76, both hemispheres 30.7
Hippocampus, CA2
nTPM: 47.7
2249 Male, age 74, both hemispheres 64.1
1963 Male, age 80, left hemisphere 52.3
2113 Female, age 91, right hemisphere 48.2
1940 Female, age 85, left hemisphere 45.8
2437 Female, age 94, left hemisphere 43.6
1892 Male, age 76, both hemispheres 32.4
Hippocampus, CA3
nTPM: 36.9
1891 Female, age 85, both hemispheres 58.5
2436 Male, age 74, both hemispheres 44.5
1867 Male, age 76, both hemispheres 40.6
2861 Female, age 67, both hemispheres 28.2
2137 Male, age 80, left hemisphere 26.4
2620 Female, age 94, left hemisphere 23.1
Parahippocampal cortex
nTPM: 40.9
2692 Male, age 74, both hemispheres 53.0
2018 Male, age 76, both hemispheres 46.3
2245 Female, age 91, both hemispheres 45.5
1990 Female, age 91, right hemisphere 45.1
2532 Female, age 72, left hemisphere 43.9
1933 Female, age 85, both hemispheres 41.4
1850 Male, age 80, both hemispheres 38.8
2250 Female, age 67, right hemisphere 37.7
2693 Female, age 94, both hemispheres 34.4
2622 Female, age 67, right hemisphere 23.1
Perirhinal gyrus
nTPM: 33.0
2521 Female, age 94, right hemisphere 36.4
1841 Female, age 85, right hemisphere 33.4
1847 Female, age 91, left hemisphere 32.4
1794 Male, age 80, right hemisphere 31.6
2848 Male, age 76, right hemisphere 31.2
Subiculum
nTPM: 57.2
2438 Female, age 94, left hemisphere 74.3
2042 Male, age 76, both hemispheres 65.0
1901 Male, age 80, both hemispheres 61.9
2729 Female, age 91, right hemisphere 49.9
1977 Female, age 85, both hemispheres 47.7
2619 Male, age 74, both hemispheres 44.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 26.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 26.2
Samples: 197

Max nTPM: 65.1
Min nTPM: 9.2
Std nTPM: 10.8
Median nTPM: 23.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 65.1
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 56.5
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 53.8
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 51.6
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 49.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 49.5
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 48.5
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 48.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 48.0
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 47.7
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 47.1
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 125.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 125.8
FF:10153-102I9 76 years, female 144.8
FF:10169-103B7 60 years, female 106.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 69.7
Pig sample Sample description nTPM
Subiculum
nTPM: 49.8
Samples: 4

Max nTPM: 56.2
Min nTPM: 44.4
Sample A Female 56.2
Sample B Female 47.9
Sample C Male 44.4
Sample D Male 50.6
Dorsal hippocampus
nTPM: 69.7
Samples: 4

Max nTPM: 93.2
Min nTPM: 40.2
Sample A Female 93.2
Sample B Female 58.4
Sample C Male 87.1
Sample D Male 40.2
Entorhinal cortex
nTPM: 46.9
Samples: 4

Max nTPM: 52.3
Min nTPM: 44.7
Sample A Female 44.9
Sample B Female 52.3
Sample C Male 45.7
Sample D Male 44.7
Ventral hippocampus
nTPM: 55.0
Samples: 4

Max nTPM: 65.6
Min nTPM: 43.5
Sample A Female 62.0
Sample B Female 43.5
Sample C Male 48.9
Sample D Male 65.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 57.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 52.2
Samples: 4

Max nTPM: 55.8
Min nTPM: 44.3
Sample A Male 55.8
Sample B Male 54.6
Sample C Female 54.0
Sample D Female 44.3
Hippocampal formation
nTPM: 57.9
Samples: 4

Max nTPM: 59.8
Min nTPM: 56.6
Sample A Male 56.6
Sample B Male 57.0
Sample C Female 58.3
Sample D Female 59.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.2
75851020 Antisense, RP_060601_02_G01, Mouse strain C57BL/6J (56 days, male) 1.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org