HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:26.7 nTPM
HPA Brain:23.0 nTPM
GTEx:26.7 nTPM
FANTOM5:68.1 Scaled Tags Per Million
Pig:30.0 nTPM
Mouse:21.7 nTPM
Allen mouse:6.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA040256Antibody HPA040381
Glial cells LowNot detected
Neuronal cells MediumLow




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 23.0
Sample id Sample description nTPM
Hippocampus
nTPM: 21.8
2529 Female, age 94, left hemisphere 25.2
1855 Male, age 76, left hemisphere 23.4
1911 Female, age 85, right hemisphere 21.2
1898 Male, age 80, left hemisphere 20.8
2148 Female, age 91, left hemisphere 20.8
2621 Female, age 67, right hemisphere 19.6
Dentate gyrus
nTPM: 18.9
2530 Female, age 94, left hemisphere 24.1
2531 Female, age 67, both hemispheres 20.3
2246 Female, age 85, both hemispheres 19.0
1927 Female, age 91, both hemispheres 17.6
2010 Male, age 76, both hemispheres 17.0
2528 Male, age 74, both hemispheres 15.1
Entorhinal gyrus
nTPM: 23.0
2686 Male, age 75, right hemisphere 29.1
1938 Female, age 85, left hemisphere 24.2
2117 Female, age 91, right hemisphere 24.1
2764 Male, age 80, right hemisphere 22.7
2613 Female, age 94, left hemisphere 19.0
1787 Male, age 76, left hemisphere 18.8
Hippocampus, CA1
nTPM: 19.4
1873 Female, age 85, both hemispheres 22.9
2749 Male, age 80, left hemisphere 20.8
2082 Female, age 91, right hemisphere 19.0
2527 Male, age 74, both hemispheres 18.4
2045 Male, age 76, both hemispheres 16.2
Hippocampus, CA2
nTPM: 20.0
1892 Male, age 76, both hemispheres 24.4
1963 Male, age 80, left hemisphere 22.0
1940 Female, age 85, left hemisphere 20.2
2113 Female, age 91, right hemisphere 19.8
2437 Female, age 94, left hemisphere 19.1
2249 Male, age 74, both hemispheres 14.8
Hippocampus, CA3
nTPM: 17.9
2137 Male, age 80, left hemisphere 22.2
1891 Female, age 85, both hemispheres 21.2
1867 Male, age 76, both hemispheres 19.2
2861 Female, age 67, both hemispheres 17.1
2436 Male, age 74, both hemispheres 14.8
2620 Female, age 94, left hemisphere 13.1
Parahippocampal cortex
nTPM: 20.1
1850 Male, age 80, both hemispheres 23.5
1990 Female, age 91, right hemisphere 22.9
2245 Female, age 91, both hemispheres 22.2
1933 Female, age 85, both hemispheres 20.7
2692 Male, age 74, both hemispheres 20.7
2250 Female, age 67, right hemisphere 20.2
2532 Female, age 72, left hemisphere 19.2
2018 Male, age 76, both hemispheres 19.0
2622 Female, age 67, right hemisphere 16.8
2693 Female, age 94, both hemispheres 16.1
Perirhinal gyrus
nTPM: 19.3
1841 Female, age 85, right hemisphere 22.9
2848 Male, age 76, right hemisphere 20.6
1847 Female, age 91, left hemisphere 19.1
1794 Male, age 80, right hemisphere 18.0
2521 Female, age 94, right hemisphere 15.9
Subiculum
nTPM: 21.5
2438 Female, age 94, left hemisphere 27.3
1901 Male, age 80, both hemispheres 24.2
1977 Female, age 85, both hemispheres 22.6
2042 Male, age 76, both hemispheres 19.4
2619 Male, age 74, both hemispheres 18.5
2729 Female, age 91, right hemisphere 17.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 26.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 26.7
Samples: 197

Max nTPM: 54.9
Min nTPM: 13.5
Std nTPM: 7.5
Median nTPM: 24.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 54.9
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 53.1
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 51.0
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 50.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 49.9
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 49.4
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 46.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 45.8
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 44.4
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 43.5
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 42.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 68.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 68.1
FF:10153-102I9 76 years, female 70.7
FF:10169-103B7 60 years, female 65.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 30.0
Pig sample Sample description nTPM
Subiculum
nTPM: 27.5
Samples: 4

Max nTPM: 32.9
Min nTPM: 22.7
Sample A Female 23.0
Sample B Female 22.7
Sample C Male 32.9
Sample D Male 31.5
Dorsal hippocampus
nTPM: 28.2
Samples: 4

Max nTPM: 37.5
Min nTPM: 18.8
Sample A Female 22.0
Sample B Female 18.8
Sample C Male 37.5
Sample D Male 34.4
Entorhinal cortex
nTPM: 30.0
Samples: 4

Max nTPM: 36.5
Min nTPM: 22.1
Sample A Female 22.1
Sample B Female 25.8
Sample C Male 35.7
Sample D Male 36.5
Ventral hippocampus
nTPM: 27.4
Samples: 4

Max nTPM: 33.8
Min nTPM: 23.6
Sample A Female 23.6
Sample B Female 24.3
Sample C Male 27.8
Sample D Male 33.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 21.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 20.4
Samples: 4

Max nTPM: 20.9
Min nTPM: 19.8
Sample A Male 20.5
Sample B Male 20.5
Sample C Female 19.8
Sample D Female 20.9
Hippocampal formation
nTPM: 21.8
Samples: 4

Max nTPM: 26.1
Min nTPM: 17.6
Sample A Male 19.2
Sample B Male 26.1
Sample C Female 24.1
Sample D Female 17.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.3
601192 Antisense, RP_040831_01_H12, Mouse strain C57BL/6J (56 days, male) 12.6
71892370 Antisense, RP_051012_01_F09, Mouse strain C57BL/6J (56 days, male) 0.0

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