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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
13.3
nTPM
HPA Brain:
11.6
nTPM
GTEx:
13.3
nTPM
FANTOM5:
22.3
Scaled Tags Per Million
Pig:
5.0
nTPM
Mouse:
0.7
nTPM
AMYGDALA - HPA Brain RNA-seq
Max nTPM
11.6
Sample id
Sample description
nTPM
Amygdala nTPM: 11.1
2695
Female, age 67, right hemisphere
18.6
2514
Male, age 75, right hemisphere
12.2
2517
Female, age 94, left hemisphere
9.0
1987
Female, age 91, left hemisphere
8.6
2814
Male, age 76, right hemisphere
7.0
Basal amygdala nTPM: 9.0
2827
Female, age 67, right hemisphere
13.9
1955
Male, age 76, both hemispheres
9.3
2609
Male, age 75, right hemisphere
8.7
2110
Male, age 80, left hemisphere
8.0
2243
Female, age 91, right hemisphere
7.7
2685
Female, age 94, left hemisphere
6.6
Central amygdala nTPM: 11.6
2826
Female, age 94, left hemisphere
14.5
2701
Female, age 91, right hemisphere
13.3
2239
Male, age 80, left hemisphere
10.7
2515
Male, age 75, right hemisphere
10.5
1905
Male, age 76, both hemispheres
8.9
Corticomedial amygdala nTPM: 7.9
2428
Male, age 75, right hemisphere
12.6
2240
Male, age 76, both hemispheres
9.3
2535
Female, age 67, right hemisphere
7.7
2242
Female, age 91, right hemisphere
6.2
2829
Male, age 80, left hemisphere
5.9
2429
Female, age 94, left hemisphere
5.5
Lateral amygdala nTPM: 11.5
2830
Female, age 67, right hemisphere
20.3
2516
Male, age 75, right hemisphere
13.2
2255
Female, age 91, right hemisphere
10.2
1883
Male, age 76, both hemispheres
9.6
2534
Female, age 94, left hemisphere
9.1
2256
Male, age 80, left hemisphere
6.5
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
13.3
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 13.3
Samples: 152
Max nTPM: 286.7
Min nTPM: 1.6
Std nTPM: 23.7
Median nTPM: 10.0
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
286.7
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
64.6
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
51.9
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
49.7
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
29.7
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
28.2
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
27.8
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
24.9
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
24.4
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
22.9
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
21.5
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
21.4
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
20.3
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
20.2
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
20.2
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
19.9
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
19.6
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
19.4
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
19.3
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
18.4
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
18.0
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
17.3
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
16.7
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
16.4
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
15.8
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
15.7
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
15.3
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
15.2
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
14.8
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
14.7
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
14.4
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
14.3
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
14.3
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
14.1
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
14.1
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
13.9
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
13.6
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
13.4
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
13.3
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
13.2
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
13.0
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
13.0
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
12.5
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
12.5
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
12.3
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
12.2
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
12.0
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
12.0
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
11.9
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
11.8
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
11.8
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
11.8
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
11.7
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
11.5
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
11.5
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
11.3
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
11.0
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
11.0
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
10.9
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
10.8
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
10.8
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
10.7
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
10.6
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
10.6
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
10.6
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
10.4
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
10.4
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
10.3
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
10.3
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
10.2
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
10.1
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
10.1
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
10.1
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
10.0
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
10.0
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
10.0
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
10.0
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
9.9
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
9.9
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
9.6
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
9.6
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
9.6
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
9.6
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
9.4
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
9.3
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
9.2
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
9.1
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
9.1
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
9.0
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
8.9
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
8.8
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
8.8
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
8.7
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
8.7
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
8.7
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
8.4
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
8.4
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
8.3
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
8.2
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
8.2
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
8.2
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
8.0
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
7.9
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
7.7
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
7.7
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
7.6
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
7.6
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
7.5
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
7.4
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
7.3
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
7.2
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
7.2
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
7.0
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
6.8
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
6.8
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
6.7
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
6.7
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
6.6
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
6.5
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
6.5
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
6.5
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
6.4
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
6.1
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
6.1
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
6.1
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
6.0
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
6.0
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
6.0
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
5.9
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
5.9
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
5.8
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
5.8
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
5.6
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
5.5
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
5.2
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
5.1
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
5.0
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
5.0
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
4.7
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
4.7
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
4.6
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
4.6
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
4.4
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
4.3
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
4.0
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
4.0
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
3.4
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
3.0
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
2.8
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
2.8
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
2.4
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
1.6
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.