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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
9.1
nTPM
HPA Brain:
33.4
nTPM
GTEx:
9.1
nTPM
FANTOM5:
10.7
Scaled Tags Per Million
Pig:
7.9
nTPM
Mouse:
14.9
nTPM
Allen mouse:
0.3
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max nTPM
33.4
Sample id
Sample description
nTPM
Amygdala nTPM: 25.4
2695
Female, age 67, right hemisphere
41.5
2814
Male, age 76, right hemisphere
29.2
2517
Female, age 94, left hemisphere
20.2
2514
Male, age 75, right hemisphere
19.3
1987
Female, age 91, left hemisphere
16.7
Basal amygdala nTPM: 25.9
2827
Female, age 67, right hemisphere
52.8
2609
Male, age 75, right hemisphere
24.1
1955
Male, age 76, both hemispheres
23.5
2685
Female, age 94, left hemisphere
20.7
2243
Female, age 91, right hemisphere
17.4
2110
Male, age 80, left hemisphere
16.7
Central amygdala nTPM: 24.1
1905
Male, age 76, both hemispheres
31.0
2826
Female, age 94, left hemisphere
30.5
2515
Male, age 75, right hemisphere
21.7
2701
Female, age 91, right hemisphere
21.7
2239
Male, age 80, left hemisphere
15.7
Corticomedial amygdala nTPM: 20.3
2535
Female, age 67, right hemisphere
26.6
2428
Male, age 75, right hemisphere
24.2
2429
Female, age 94, left hemisphere
20.4
2240
Male, age 76, both hemispheres
17.7
2829
Male, age 80, left hemisphere
17.4
2242
Female, age 91, right hemisphere
15.5
Lateral amygdala nTPM: 33.4
2830
Female, age 67, right hemisphere
79.3
2534
Female, age 94, left hemisphere
30.0
2516
Male, age 75, right hemisphere
28.7
1883
Male, age 76, both hemispheres
22.2
2255
Female, age 91, right hemisphere
21.7
2256
Male, age 80, left hemisphere
18.5
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
9.1
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 9.1
Samples: 152
Max nTPM: 29.5
Min nTPM: 1.4
Std nTPM: 5.1
Median nTPM: 7.9
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
29.5
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
28.8
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
27.6
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
26.0
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
23.9
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
21.5
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
21.3
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
20.0
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
19.2
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
19.1
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
18.8
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
18.0
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
17.9
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
17.5
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
15.9
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
15.6
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
15.1
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
14.6
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
14.5
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
13.3
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
13.2
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
13.2
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
13.2
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
12.9
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
12.8
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
12.6
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
12.0
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
11.8
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
11.5
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
11.5
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
11.4
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
11.2
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
11.0
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
11.0
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
10.5
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
10.4
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
10.4
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
10.3
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
10.2
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
10.1
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
9.7
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
9.6
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
9.6
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
9.6
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
9.5
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
9.5
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
9.4
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
9.4
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
9.4
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
9.3
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
9.3
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
9.2
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
9.2
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
9.2
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
9.1
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
9.1
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
9.1
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
9.0
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
9.0
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
8.9
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
8.8
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
8.8
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
8.6
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
8.5
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
8.5
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
8.4
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
8.4
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
8.4
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
8.3
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
8.2
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
8.2
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
8.2
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
8.1
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
8.1
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
8.0
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
7.9
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
7.9
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
7.8
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
7.8
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
7.7
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
7.7
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
7.5
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
7.5
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
7.4
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
7.4
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
7.3
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
7.2
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
7.2
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
7.1
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
7.1
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
7.0
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
7.0
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
6.9
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
6.8
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
6.8
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
6.8
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
6.7
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
6.6
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
6.6
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
6.6
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
6.6
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
6.5
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
6.4
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
6.4
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
6.4
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
6.3
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
6.3
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
6.3
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
6.2
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
6.2
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
6.1
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
6.1
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
6.1
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
6.1
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
6.1
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
6.1
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
5.9
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
5.7
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
5.6
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
5.5
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
5.5
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
5.4
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
5.4
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
5.3
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
5.2
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
5.2
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
5.1
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
5.1
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
5.1
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
5.1
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
4.9
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
4.9
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
4.9
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
4.9
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
4.8
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
4.8
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
4.6
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
4.5
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
4.0
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
3.8
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
3.8
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
3.8
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
3.7
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
3.5
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
3.5
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
3.4
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
2.9
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
2.9
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
2.7
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
2.3
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
1.4
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
1.4
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
14.9
Mouse sample
Sample description
nTPM
Amygdala nTPM: 14.9
Samples: 4
Max nTPM: 16.4
Min nTPM: 13.1
Sample A
Male
16.4
Sample B
Male
14.9
Sample C
Female
13.1
Sample D
Female
15.3
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.