HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:49.7 nTPM
HPA Brain:61.7 nTPM
GTEx:49.7 nTPM
FANTOM5:70.9 Scaled Tags Per Million
Pig:51.8 nTPM
Mouse:96.4 nTPM
Allen mouse:16.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035790
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 61.7
Sample id Sample description nTPM
Hippocampus
nTPM: 45.3
1898 Male, age 80, left hemisphere 62.1
1855 Male, age 76, left hemisphere 51.5
2621 Female, age 67, right hemisphere 46.2
2529 Female, age 94, left hemisphere 38.6
1911 Female, age 85, right hemisphere 38.1
2148 Female, age 91, left hemisphere 35.3
Dentate gyrus
nTPM: 47.0
1927 Female, age 91, both hemispheres 59.8
2010 Male, age 76, both hemispheres 56.0
2246 Female, age 85, both hemispheres 49.0
2528 Male, age 74, both hemispheres 41.8
2530 Female, age 94, left hemisphere 41.2
2531 Female, age 67, both hemispheres 34.5
Entorhinal gyrus
nTPM: 43.6
1938 Female, age 85, left hemisphere 57.2
1787 Male, age 76, left hemisphere 47.3
2764 Male, age 80, right hemisphere 47.3
2613 Female, age 94, left hemisphere 41.9
2117 Female, age 91, right hemisphere 34.0
2686 Male, age 75, right hemisphere 33.6
Hippocampus, CA1
nTPM: 52.4
2749 Male, age 80, left hemisphere 71.5
1873 Female, age 85, both hemispheres 58.6
2045 Male, age 76, both hemispheres 52.2
2527 Male, age 74, both hemispheres 43.8
2082 Female, age 91, right hemisphere 36.0
Hippocampus, CA2
nTPM: 48.7
1892 Male, age 76, both hemispheres 69.3
1963 Male, age 80, left hemisphere 54.2
2249 Male, age 74, both hemispheres 46.1
1940 Female, age 85, left hemisphere 42.9
2437 Female, age 94, left hemisphere 42.5
2113 Female, age 91, right hemisphere 37.5
Hippocampus, CA3
nTPM: 45.4
2137 Male, age 80, left hemisphere 58.5
1867 Male, age 76, both hemispheres 53.5
2436 Male, age 74, both hemispheres 48.5
1891 Female, age 85, both hemispheres 43.7
2620 Female, age 94, left hemisphere 39.3
2861 Female, age 67, both hemispheres 29.0
Parahippocampal cortex
nTPM: 48.0
1850 Male, age 80, both hemispheres 66.9
1933 Female, age 85, both hemispheres 54.9
1990 Female, age 91, right hemisphere 53.5
2693 Female, age 94, both hemispheres 50.0
2250 Female, age 67, right hemisphere 48.1
2018 Male, age 76, both hemispheres 46.4
2245 Female, age 91, both hemispheres 43.2
2692 Male, age 74, both hemispheres 42.8
2532 Female, age 72, left hemisphere 41.8
2622 Female, age 67, right hemisphere 32.1
Perirhinal gyrus
nTPM: 61.7
1847 Female, age 91, left hemisphere 74.7
1841 Female, age 85, right hemisphere 64.0
1794 Male, age 80, right hemisphere 61.7
2521 Female, age 94, right hemisphere 57.9
2848 Male, age 76, right hemisphere 50.2
Subiculum
nTPM: 42.9
2438 Female, age 94, left hemisphere 51.8
1977 Female, age 85, both hemispheres 49.9
1901 Male, age 80, both hemispheres 46.6
2729 Female, age 91, right hemisphere 37.0
2619 Male, age 74, both hemispheres 36.7
2042 Male, age 76, both hemispheres 35.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 49.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 49.7
Samples: 197

Max nTPM: 147.1
Min nTPM: 21.0
Std nTPM: 20.1
Median nTPM: 45.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 147.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 114.9
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 101.2
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 92.0
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 89.8
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 86.2
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 85.9
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 85.3
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 85.3
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 85.0
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 84.9
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 70.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 70.9
FF:10169-103B7 60 years, female 82.0
FF:10153-102I9 76 years, female 59.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 51.8
Pig sample Sample description nTPM
Subiculum
nTPM: 36.4
Samples: 4

Max nTPM: 42.7
Min nTPM: 33.5
Sample A Female 42.7
Sample B Female 34.7
Sample C Male 33.5
Sample D Male 34.7
Dorsal hippocampus
nTPM: 51.8
Samples: 4

Max nTPM: 63.6
Min nTPM: 41.9
Sample A Female 63.6
Sample B Female 57.9
Sample C Male 43.9
Sample D Male 41.9
Entorhinal cortex
nTPM: 37.6
Samples: 4

Max nTPM: 46.4
Min nTPM: 30.5
Sample A Female 42.7
Sample B Female 46.4
Sample C Male 30.8
Sample D Male 30.5
Ventral hippocampus
nTPM: 41.2
Samples: 4

Max nTPM: 51.4
Min nTPM: 32.4
Sample A Female 48.0
Sample B Female 32.4
Sample C Male 32.8
Sample D Male 51.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 96.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 83.2
Samples: 4

Max nTPM: 86.7
Min nTPM: 77.8
Sample A Male 77.8
Sample B Male 86.7
Sample C Female 84.6
Sample D Female 83.7
Hippocampal formation
nTPM: 96.5
Samples: 4

Max nTPM: 110.0
Min nTPM: 79.0
Sample A Male 110.0
Sample B Male 94.4
Sample C Female 102.4
Sample D Female 79.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 16.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 16.4
71608294 Antisense, RP_050927_01_D09, Mouse strain C57BL/6J (56 days, male) 18.2
293038 Antisense, RP_040609_01_F01, Mouse strain C57BL/6J (56 days, male) 14.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org