HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:47.1 nTPM
HPA Brain:37.6 nTPM
GTEx:47.1 nTPM
FANTOM5:99.7 Scaled Tags Per Million
Pig:32.1 nTPM
Mouse:7.5 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039989
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 37.6
Sample id Sample description nTPM
Hippocampus
nTPM: 37.6
2529 Female, age 94, left hemisphere 45.2
1898 Male, age 80, left hemisphere 41.4
1911 Female, age 85, right hemisphere 37.9
2621 Female, age 67, right hemisphere 34.7
1855 Male, age 76, left hemisphere 33.8
2148 Female, age 91, left hemisphere 32.8
Dentate gyrus
nTPM: 36.7
2530 Female, age 94, left hemisphere 49.7
2010 Male, age 76, both hemispheres 44.8
2528 Male, age 74, both hemispheres 35.4
2531 Female, age 67, both hemispheres 33.6
2246 Female, age 85, both hemispheres 31.5
1927 Female, age 91, both hemispheres 25.1
Entorhinal gyrus
nTPM: 33.8
2686 Male, age 75, right hemisphere 45.7
2117 Female, age 91, right hemisphere 41.9
1938 Female, age 85, left hemisphere 31.3
2764 Male, age 80, right hemisphere 29.9
1787 Male, age 76, left hemisphere 29.5
2613 Female, age 94, left hemisphere 24.7
Hippocampus, CA1
nTPM: 30.4
2082 Female, age 91, right hemisphere 35.7
1873 Female, age 85, both hemispheres 32.8
2527 Male, age 74, both hemispheres 32.6
2045 Male, age 76, both hemispheres 26.7
2749 Male, age 80, left hemisphere 24.4
Hippocampus, CA2
nTPM: 35.4
1940 Female, age 85, left hemisphere 41.3
2113 Female, age 91, right hemisphere 39.0
2249 Male, age 74, both hemispheres 37.9
1963 Male, age 80, left hemisphere 34.1
2437 Female, age 94, left hemisphere 32.6
1892 Male, age 76, both hemispheres 27.4
Hippocampus, CA3
nTPM: 29.5
2861 Female, age 67, both hemispheres 35.0
1867 Male, age 76, both hemispheres 33.6
1891 Female, age 85, both hemispheres 33.4
2436 Male, age 74, both hemispheres 27.3
2137 Male, age 80, left hemisphere 24.7
2620 Female, age 94, left hemisphere 22.9
Parahippocampal cortex
nTPM: 30.7
2018 Male, age 76, both hemispheres 35.8
2692 Male, age 74, both hemispheres 33.8
2245 Female, age 91, both hemispheres 33.7
2532 Female, age 72, left hemisphere 32.9
1933 Female, age 85, both hemispheres 31.0
1990 Female, age 91, right hemisphere 29.2
2622 Female, age 67, right hemisphere 29.2
2250 Female, age 67, right hemisphere 27.9
1850 Male, age 80, both hemispheres 27.8
2693 Female, age 94, both hemispheres 25.6
Perirhinal gyrus
nTPM: 24.3
1794 Male, age 80, right hemisphere 27.1
2848 Male, age 76, right hemisphere 25.3
1841 Female, age 85, right hemisphere 23.4
2521 Female, age 94, right hemisphere 23.2
1847 Female, age 91, left hemisphere 22.5
Subiculum
nTPM: 35.7
2042 Male, age 76, both hemispheres 49.3
1901 Male, age 80, both hemispheres 36.7
2729 Female, age 91, right hemisphere 35.8
2438 Female, age 94, left hemisphere 33.1
1977 Female, age 85, both hemispheres 30.9
2619 Male, age 74, both hemispheres 28.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 47.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 47.1
Samples: 197

Max nTPM: 157.6
Min nTPM: 17.7
Std nTPM: 22.2
Median nTPM: 40.8
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 157.6
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 119.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 113.9
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 112.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 104.3
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 103.1
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 102.3
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 100.0
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 97.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 93.8
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 92.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 99.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 99.7
FF:10153-102I9 76 years, female 111.2
FF:10169-103B7 60 years, female 88.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 32.1
Pig sample Sample description nTPM
Subiculum
nTPM: 32.1
Samples: 4

Max nTPM: 35.1
Min nTPM: 26.5
Sample A Female 34.8
Sample B Female 26.5
Sample C Male 31.8
Sample D Male 35.1
Dorsal hippocampus
nTPM: 20.7
Samples: 4

Max nTPM: 25.1
Min nTPM: 18.5
Sample A Female 19.9
Sample B Female 18.5
Sample C Male 25.1
Sample D Male 19.2
Entorhinal cortex
nTPM: 28.5
Samples: 4

Max nTPM: 31.5
Min nTPM: 24.3
Sample A Female 30.8
Sample B Female 27.5
Sample C Male 31.5
Sample D Male 24.3
Ventral hippocampus
nTPM: 26.4
Samples: 4

Max nTPM: 32.5
Min nTPM: 21.9
Sample A Female 25.3
Sample B Female 25.9
Sample C Male 32.5
Sample D Male 21.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 7.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 7.5
Samples: 4

Max nTPM: 8.9
Min nTPM: 5.8
Sample A Male 8.9
Sample B Male 7.8
Sample C Female 7.4
Sample D Female 5.8
Hippocampal formation
nTPM: 6.0
Samples: 4

Max nTPM: 9.7
Min nTPM: 4.5
Sample A Male 5.2
Sample B Male 4.5
Sample C Female 4.7
Sample D Female 9.7

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