HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:17.3 nTPM
HPA Brain:26.6 nTPM
GTEx:17.3 nTPM
FANTOM5:59.9 Scaled Tags Per Million
Pig:38.4 nTPM
Mouse:25.7 nTPM
Allen mouse:1.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035519
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 26.6
Sample id Sample description nTPM
Hippocampus
nTPM: 25.9
1898 Male, age 80, left hemisphere 29.7
1855 Male, age 76, left hemisphere 28.4
1911 Female, age 85, right hemisphere 28.2
2529 Female, age 94, left hemisphere 24.2
2621 Female, age 67, right hemisphere 23.0
2148 Female, age 91, left hemisphere 22.1
Dentate gyrus
nTPM: 24.7
2528 Male, age 74, both hemispheres 29.1
2010 Male, age 76, both hemispheres 27.7
2246 Female, age 85, both hemispheres 24.6
1927 Female, age 91, both hemispheres 23.2
2530 Female, age 94, left hemisphere 21.9
2531 Female, age 67, both hemispheres 21.5
Entorhinal gyrus
nTPM: 24.6
2117 Female, age 91, right hemisphere 29.0
1938 Female, age 85, left hemisphere 25.2
1787 Male, age 76, left hemisphere 23.8
2613 Female, age 94, left hemisphere 23.6
2686 Male, age 75, right hemisphere 23.1
2764 Male, age 80, right hemisphere 22.7
Hippocampus, CA1
nTPM: 24.7
2749 Male, age 80, left hemisphere 27.4
2527 Male, age 74, both hemispheres 26.3
1873 Female, age 85, both hemispheres 25.2
2045 Male, age 76, both hemispheres 22.5
2082 Female, age 91, right hemisphere 22.2
Hippocampus, CA2
nTPM: 25.3
2249 Male, age 74, both hemispheres 29.3
1892 Male, age 76, both hemispheres 27.1
1963 Male, age 80, left hemisphere 24.7
1940 Female, age 85, left hemisphere 24.4
2437 Female, age 94, left hemisphere 23.6
2113 Female, age 91, right hemisphere 22.7
Hippocampus, CA3
nTPM: 25.8
1891 Female, age 85, both hemispheres 29.2
2436 Male, age 74, both hemispheres 29.0
2137 Male, age 80, left hemisphere 26.7
1867 Male, age 76, both hemispheres 26.3
2620 Female, age 94, left hemisphere 26.3
2861 Female, age 67, both hemispheres 17.1
Parahippocampal cortex
nTPM: 24.9
1850 Male, age 80, both hemispheres 29.8
2693 Female, age 94, both hemispheres 28.6
2692 Male, age 74, both hemispheres 27.6
1990 Female, age 91, right hemisphere 27.4
1933 Female, age 85, both hemispheres 25.7
2532 Female, age 72, left hemisphere 24.9
2018 Male, age 76, both hemispheres 23.3
2250 Female, age 67, right hemisphere 21.5
2245 Female, age 91, both hemispheres 20.2
2622 Female, age 67, right hemisphere 20.0
Perirhinal gyrus
nTPM: 25.6
1841 Female, age 85, right hemisphere 27.7
1794 Male, age 80, right hemisphere 26.4
2521 Female, age 94, right hemisphere 25.3
2848 Male, age 76, right hemisphere 24.8
1847 Female, age 91, left hemisphere 23.5
Subiculum
nTPM: 26.6
1977 Female, age 85, both hemispheres 31.2
1901 Male, age 80, both hemispheres 30.1
2042 Male, age 76, both hemispheres 27.6
2619 Male, age 74, both hemispheres 25.7
2729 Female, age 91, right hemisphere 22.7
2438 Female, age 94, left hemisphere 22.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 17.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.3
Samples: 197

Max nTPM: 32.6
Min nTPM: 8.9
Std nTPM: 5.0
Median nTPM: 16.4
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 32.6
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 30.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 30.2
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 30.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 29.2
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 28.4
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 28.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 27.9
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 27.8
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 27.6
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 26.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 59.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 59.9
FF:10169-103B7 60 years, female 63.3
FF:10153-102I9 76 years, female 56.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 38.4
Pig sample Sample description nTPM
Subiculum
nTPM: 33.7
Samples: 4

Max nTPM: 38.2
Min nTPM: 28.8
Sample A Female 38.2
Sample B Female 33.4
Sample C Male 28.8
Sample D Male 34.2
Dorsal hippocampus
nTPM: 38.4
Samples: 4

Max nTPM: 43.8
Min nTPM: 33.1
Sample A Female 43.8
Sample B Female 37.6
Sample C Male 39.1
Sample D Male 33.1
Entorhinal cortex
nTPM: 37.9
Samples: 4

Max nTPM: 42.5
Min nTPM: 33.7
Sample A Female 40.3
Sample B Female 42.5
Sample C Male 35.1
Sample D Male 33.7
Ventral hippocampus
nTPM: 33.9
Samples: 4

Max nTPM: 40.3
Min nTPM: 29.8
Sample A Female 40.3
Sample B Female 29.8
Sample C Male 30.7
Sample D Male 34.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 25.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 23.5
Samples: 4

Max nTPM: 25.5
Min nTPM: 21.4
Sample A Male 23.8
Sample B Male 25.5
Sample C Female 23.1
Sample D Female 21.4
Hippocampal formation
nTPM: 25.7
Samples: 4

Max nTPM: 27.2
Min nTPM: 23.4
Sample A Male 26.9
Sample B Male 25.3
Sample C Female 27.2
Sample D Female 23.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.4
74990491 Antisense, RP_060410_01_B01, Mouse strain C57BL/6J (56 days, male) 1.4

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