HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:75.5 nTPM
HPA Brain:177.8 nTPM
GTEx:75.5 nTPM
FANTOM5:111.5 Scaled Tags Per Million
Pig:102.2 nTPM
Mouse:113.9 nTPM
Allen mouse:9.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA010631
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 177.8
Sample id Sample description nTPM
Hippocampus
nTPM: 134.7
2621 Female, age 67, right hemisphere 212.4
2148 Female, age 91, left hemisphere 159.4
1855 Male, age 76, left hemisphere 127.1
1898 Male, age 80, left hemisphere 118.9
2529 Female, age 94, left hemisphere 99.3
1911 Female, age 85, right hemisphere 91.2
Dentate gyrus
nTPM: 138.8
2531 Female, age 67, both hemispheres 188.5
2246 Female, age 85, both hemispheres 155.6
1927 Female, age 91, both hemispheres 142.9
2530 Female, age 94, left hemisphere 139.5
2528 Male, age 74, both hemispheres 105.9
2010 Male, age 76, both hemispheres 100.5
Entorhinal gyrus
nTPM: 177.8
2613 Female, age 94, left hemisphere 316.4
2686 Male, age 75, right hemisphere 189.2
1938 Female, age 85, left hemisphere 160.8
2764 Male, age 80, right hemisphere 156.3
1787 Male, age 76, left hemisphere 151.2
2117 Female, age 91, right hemisphere 93.0
Hippocampus, CA1
nTPM: 129.8
2045 Male, age 76, both hemispheres 164.4
2749 Male, age 80, left hemisphere 139.9
1873 Female, age 85, both hemispheres 119.2
2082 Female, age 91, right hemisphere 116.5
2527 Male, age 74, both hemispheres 109.1
Hippocampus, CA2
nTPM: 108.0
1892 Male, age 76, both hemispheres 144.4
2437 Female, age 94, left hemisphere 125.0
1940 Female, age 85, left hemisphere 108.8
2113 Female, age 91, right hemisphere 108.1
1963 Male, age 80, left hemisphere 89.1
2249 Male, age 74, both hemispheres 72.6
Hippocampus, CA3
nTPM: 159.8
2620 Female, age 94, left hemisphere 286.0
2861 Female, age 67, both hemispheres 260.7
2137 Male, age 80, left hemisphere 130.6
1867 Male, age 76, both hemispheres 111.2
1891 Female, age 85, both hemispheres 91.1
2436 Male, age 74, both hemispheres 79.1
Parahippocampal cortex
nTPM: 158.1
2622 Female, age 67, right hemisphere 250.9
2245 Female, age 91, both hemispheres 190.7
2693 Female, age 94, both hemispheres 174.3
2692 Male, age 74, both hemispheres 168.1
2532 Female, age 72, left hemisphere 143.4
1850 Male, age 80, both hemispheres 140.5
1933 Female, age 85, both hemispheres 138.2
2250 Female, age 67, right hemisphere 137.3
1990 Female, age 91, right hemisphere 133.9
2018 Male, age 76, both hemispheres 103.9
Perirhinal gyrus
nTPM: 161.1
1847 Female, age 91, left hemisphere 183.1
2848 Male, age 76, right hemisphere 163.8
1794 Male, age 80, right hemisphere 158.0
2521 Female, age 94, right hemisphere 155.9
1841 Female, age 85, right hemisphere 144.8
Subiculum
nTPM: 107.8
2619 Male, age 74, both hemispheres 147.9
1977 Female, age 85, both hemispheres 118.2
2438 Female, age 94, left hemisphere 104.9
2729 Female, age 91, right hemisphere 97.7
1901 Male, age 80, both hemispheres 95.7
2042 Male, age 76, both hemispheres 82.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 75.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 75.5
Samples: 197

Max nTPM: 164.0
Min nTPM: 4.2
Std nTPM: 39.3
Median nTPM: 75.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 164.0
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 163.0
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 157.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 157.3
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 152.0
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 151.9
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 149.7
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 145.6
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 143.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 143.2
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 142.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 111.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 111.5
FF:10153-102I9 76 years, female 118.1
FF:10169-103B7 60 years, female 104.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 102.2
Pig sample Sample description nTPM
Subiculum
nTPM: 102.3
Samples: 4

Max nTPM: 135.2
Min nTPM: 79.8
Sample A Female 135.2
Sample B Female 85.2
Sample C Male 108.9
Sample D Male 79.8
Dorsal hippocampus
nTPM: 79.2
Samples: 4

Max nTPM: 88.7
Min nTPM: 71.7
Sample A Female 83.8
Sample B Female 88.7
Sample C Male 71.7
Sample D Male 72.5
Entorhinal cortex
nTPM: 99.1
Samples: 4

Max nTPM: 114.4
Min nTPM: 73.8
Sample A Female 107.4
Sample B Female 73.8
Sample C Male 114.4
Sample D Male 100.6
Ventral hippocampus
nTPM: 93.0
Samples: 4

Max nTPM: 132.0
Min nTPM: 72.3
Sample A Female 75.1
Sample B Female 72.3
Sample C Male 132.0
Sample D Male 92.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 113.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 113.9
Samples: 4

Max nTPM: 129.4
Min nTPM: 105.3
Sample A Male 115.6
Sample B Male 105.4
Sample C Female 105.3
Sample D Female 129.4
Hippocampal formation
nTPM: 102.9
Samples: 4

Max nTPM: 114.4
Min nTPM: 92.0
Sample A Male 92.0
Sample B Male 114.4
Sample C Female 98.5
Sample D Female 106.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.6
69531043 Antisense, RP_050426_01_B04, Mouse strain C57BL/6J (56 days, male) 9.6

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