HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:20.8 nTPM
HPA Brain:23.4 nTPM
GTEx:20.8 nTPM
FANTOM5:71.3 Scaled Tags Per Million
Pig:23.0 nTPM
Mouse:18.9 nTPM

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 23.4
Sample id Sample description nTPM
Hippocampus
nTPM: 22.6
1855 Male, age 76, left hemisphere 28.2
2621 Female, age 67, right hemisphere 24.8
1911 Female, age 85, right hemisphere 21.3
2529 Female, age 94, left hemisphere 21.2
1898 Male, age 80, left hemisphere 20.9
2148 Female, age 91, left hemisphere 18.9
Dentate gyrus
nTPM: 20.5
2246 Female, age 85, both hemispheres 23.5
2528 Male, age 74, both hemispheres 22.5
2010 Male, age 76, both hemispheres 20.9
2530 Female, age 94, left hemisphere 20.5
1927 Female, age 91, both hemispheres 20.3
2531 Female, age 67, both hemispheres 15.1
Entorhinal gyrus
nTPM: 20.2
1938 Female, age 85, left hemisphere 22.7
1787 Male, age 76, left hemisphere 22.5
2764 Male, age 80, right hemisphere 21.2
2117 Female, age 91, right hemisphere 20.1
2686 Male, age 75, right hemisphere 19.0
2613 Female, age 94, left hemisphere 15.8
Hippocampus, CA1
nTPM: 21.1
2749 Male, age 80, left hemisphere 23.1
2045 Male, age 76, both hemispheres 21.9
2527 Male, age 74, both hemispheres 21.8
1873 Female, age 85, both hemispheres 21.6
2082 Female, age 91, right hemisphere 16.9
Hippocampus, CA2
nTPM: 20.5
2249 Male, age 74, both hemispheres 25.4
1892 Male, age 76, both hemispheres 25.3
1940 Female, age 85, left hemisphere 22.3
2113 Female, age 91, right hemisphere 18.1
2437 Female, age 94, left hemisphere 16.6
1963 Male, age 80, left hemisphere 15.3
Hippocampus, CA3
nTPM: 20.3
1891 Female, age 85, both hemispheres 24.0
2436 Male, age 74, both hemispheres 22.1
1867 Male, age 76, both hemispheres 20.9
2137 Male, age 80, left hemisphere 20.4
2620 Female, age 94, left hemisphere 17.8
2861 Female, age 67, both hemispheres 16.9
Parahippocampal cortex
nTPM: 21.2
2250 Female, age 67, right hemisphere 24.1
2245 Female, age 91, both hemispheres 23.8
1933 Female, age 85, both hemispheres 23.4
2532 Female, age 72, left hemisphere 21.9
2018 Male, age 76, both hemispheres 21.4
1850 Male, age 80, both hemispheres 21.3
1990 Female, age 91, right hemisphere 20.6
2692 Male, age 74, both hemispheres 20.0
2693 Female, age 94, both hemispheres 18.6
2622 Female, age 67, right hemisphere 17.2
Perirhinal gyrus
nTPM: 23.4
1794 Male, age 80, right hemisphere 27.2
1841 Female, age 85, right hemisphere 24.7
1847 Female, age 91, left hemisphere 23.2
2521 Female, age 94, right hemisphere 21.9
2848 Male, age 76, right hemisphere 20.2
Subiculum
nTPM: 22.7
2438 Female, age 94, left hemisphere 28.3
2619 Male, age 74, both hemispheres 23.2
1977 Female, age 85, both hemispheres 22.9
2042 Male, age 76, both hemispheres 22.1
1901 Male, age 80, both hemispheres 21.5
2729 Female, age 91, right hemisphere 18.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.8
Samples: 197

Max nTPM: 43.5
Min nTPM: 10.6
Std nTPM: 4.8
Median nTPM: 20.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 43.5
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 36.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 34.8
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 34.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 33.7
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 32.1
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 31.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 31.1
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 30.1
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 29.8
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 29.2
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 71.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 71.3
FF:10169-103B7 60 years, female 83.0
FF:10153-102I9 76 years, female 59.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 23.0
Pig sample Sample description nTPM
Subiculum
nTPM: 18.7
Samples: 4

Max nTPM: 22.8
Min nTPM: 15.0
Sample A Female 22.8
Sample B Female 18.2
Sample C Male 18.6
Sample D Male 15.0
Dorsal hippocampus
nTPM: 23.1
Samples: 4

Max nTPM: 28.5
Min nTPM: 20.6
Sample A Female 28.5
Sample B Female 20.6
Sample C Male 21.7
Sample D Male 21.4
Entorhinal cortex
nTPM: 18.5
Samples: 4

Max nTPM: 25.3
Min nTPM: 13.2
Sample A Female 17.8
Sample B Female 25.3
Sample C Male 17.6
Sample D Male 13.2
Ventral hippocampus
nTPM: 20.0
Samples: 4

Max nTPM: 22.7
Min nTPM: 17.1
Sample A Female 22.7
Sample B Female 17.1
Sample C Male 19.3
Sample D Male 20.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 18.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 18.9
Samples: 4

Max nTPM: 21.3
Min nTPM: 16.0
Sample A Male 19.7
Sample B Male 21.3
Sample C Female 16.0
Sample D Female 18.7
Hippocampal formation
nTPM: 18.6
Samples: 4

Max nTPM: 19.9
Min nTPM: 16.8
Sample A Male 18.1
Sample B Male 16.8
Sample C Female 19.4
Sample D Female 19.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org