HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:15.7 nTPM
HPA Brain:28.9 nTPM
GTEx:15.7 nTPM
FANTOM5:20.2 Scaled Tags Per Million
Pig:22.8 nTPM
Mouse:22.1 nTPM
Allen mouse:3.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039094Antibody HPA039095
Glial cells Not detectedNot detected
Neuronal cells Not detectedMedium




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 28.9
Sample id Sample description nTPM
Hippocampus
nTPM: 26.5
2148 Female, age 91, left hemisphere 33.6
1898 Male, age 80, left hemisphere 30.6
2621 Female, age 67, right hemisphere 28.2
1855 Male, age 76, left hemisphere 23.5
2529 Female, age 94, left hemisphere 22.0
1911 Female, age 85, right hemisphere 21.3
Dentate gyrus
nTPM: 28.2
2530 Female, age 94, left hemisphere 32.0
1927 Female, age 91, both hemispheres 30.9
2531 Female, age 67, both hemispheres 29.6
2010 Male, age 76, both hemispheres 25.8
2528 Male, age 74, both hemispheres 25.7
2246 Female, age 85, both hemispheres 25.1
Entorhinal gyrus
nTPM: 25.6
2613 Female, age 94, left hemisphere 30.7
2764 Male, age 80, right hemisphere 29.7
1787 Male, age 76, left hemisphere 25.2
1938 Female, age 85, left hemisphere 24.6
2686 Male, age 75, right hemisphere 23.6
2117 Female, age 91, right hemisphere 19.9
Hippocampus, CA1
nTPM: 28.1
2749 Male, age 80, left hemisphere 39.6
2527 Male, age 74, both hemispheres 27.5
1873 Female, age 85, both hemispheres 25.2
2045 Male, age 76, both hemispheres 24.1
2082 Female, age 91, right hemisphere 24.0
Hippocampus, CA2
nTPM: 26.4
1963 Male, age 80, left hemisphere 32.1
1892 Male, age 76, both hemispheres 29.8
2437 Female, age 94, left hemisphere 26.9
1940 Female, age 85, left hemisphere 23.5
2249 Male, age 74, both hemispheres 23.1
2113 Female, age 91, right hemisphere 23.0
Hippocampus, CA3
nTPM: 28.9
2861 Female, age 67, both hemispheres 38.3
2620 Female, age 94, left hemisphere 32.2
2137 Male, age 80, left hemisphere 32.0
1867 Male, age 76, both hemispheres 24.2
2436 Male, age 74, both hemispheres 23.9
1891 Female, age 85, both hemispheres 23.0
Parahippocampal cortex
nTPM: 25.4
2245 Female, age 91, both hemispheres 29.6
1850 Male, age 80, both hemispheres 28.0
2622 Female, age 67, right hemisphere 26.7
2693 Female, age 94, both hemispheres 26.4
1990 Female, age 91, right hemisphere 24.6
2692 Male, age 74, both hemispheres 24.6
1933 Female, age 85, both hemispheres 24.5
2532 Female, age 72, left hemisphere 24.2
2250 Female, age 67, right hemisphere 23.7
2018 Male, age 76, both hemispheres 22.1
Perirhinal gyrus
nTPM: 28.5
1847 Female, age 91, left hemisphere 35.1
1794 Male, age 80, right hemisphere 31.4
2521 Female, age 94, right hemisphere 27.5
1841 Female, age 85, right hemisphere 25.9
2848 Male, age 76, right hemisphere 22.6
Subiculum
nTPM: 22.2
2619 Male, age 74, both hemispheres 25.7
1977 Female, age 85, both hemispheres 25.4
1901 Male, age 80, both hemispheres 23.7
2438 Female, age 94, left hemisphere 21.1
2729 Female, age 91, right hemisphere 21.0
2042 Male, age 76, both hemispheres 16.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.7
Samples: 197

Max nTPM: 33.2
Min nTPM: 5.6
Std nTPM: 5.6
Median nTPM: 15.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 33.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 32.0
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 31.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 29.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 28.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 27.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 27.1
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 25.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 25.0
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 24.7
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 24.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 20.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 20.2
FF:10153-102I9 76 years, female 23.9
FF:10169-103B7 60 years, female 16.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 22.8
Pig sample Sample description nTPM
Subiculum
nTPM: 22.0
Samples: 4

Max nTPM: 23.7
Min nTPM: 19.9
Sample A Female 23.7
Sample B Female 19.9
Sample C Male 22.9
Sample D Male 21.3
Dorsal hippocampus
nTPM: 22.6
Samples: 4

Max nTPM: 24.7
Min nTPM: 20.8
Sample A Female 24.7
Sample B Female 23.7
Sample C Male 20.8
Sample D Male 21.0
Entorhinal cortex
nTPM: 22.0
Samples: 4

Max nTPM: 23.8
Min nTPM: 20.4
Sample A Female 23.8
Sample B Female 20.4
Sample C Male 22.4
Sample D Male 21.3
Ventral hippocampus
nTPM: 22.8
Samples: 4

Max nTPM: 27.8
Min nTPM: 17.9
Sample A Female 23.0
Sample B Female 17.9
Sample C Male 27.8
Sample D Male 22.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 22.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 22.1
Samples: 4

Max nTPM: 23.7
Min nTPM: 19.8
Sample A Male 19.8
Sample B Male 22.9
Sample C Female 23.7
Sample D Female 21.8
Hippocampal formation
nTPM: 18.0
Samples: 4

Max nTPM: 19.3
Min nTPM: 16.2
Sample A Male 19.3
Sample B Male 17.6
Sample C Female 16.2
Sample D Female 19.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.0
68445694 Antisense, RP_050113_01_B04, Mouse strain C57BL/6J (56 days, male) 3.0

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