HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni
Consensus:61.5 nTPM
HPA Brain:72.1 nTPM
GTEx:61.5 nTPM
FANTOM5:65.4 Scaled Tags Per Million
Pig:52.3 nTPM
Mouse:56.0 nTPM
Allen mouse:2.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA056461Antibody HPA065503
Glial cells HighMedium
Neuronal cells Not detectedNot detected




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 72.1
Sample id Sample description nTPM
Hippocampus
nTPM: 51.7
2529 Female, age 94, left hemisphere 61.7
1911 Female, age 85, right hemisphere 60.2
1898 Male, age 80, left hemisphere 49.5
1855 Male, age 76, left hemisphere 48.1
2621 Female, age 67, right hemisphere 47.4
2148 Female, age 91, left hemisphere 43.0
Dentate gyrus
nTPM: 51.5
2530 Female, age 94, left hemisphere 73.3
2010 Male, age 76, both hemispheres 62.1
2528 Male, age 74, both hemispheres 55.3
2246 Female, age 85, both hemispheres 42.3
2531 Female, age 67, both hemispheres 40.3
1927 Female, age 91, both hemispheres 35.4
Entorhinal gyrus
nTPM: 55.8
2117 Female, age 91, right hemisphere 91.8
2764 Male, age 80, right hemisphere 66.7
1787 Male, age 76, left hemisphere 46.5
1938 Female, age 85, left hemisphere 45.8
2686 Male, age 75, right hemisphere 43.2
2613 Female, age 94, left hemisphere 40.8
Hippocampus, CA1
nTPM: 42.4
2527 Male, age 74, both hemispheres 45.7
2082 Female, age 91, right hemisphere 44.1
1873 Female, age 85, both hemispheres 43.7
2749 Male, age 80, left hemisphere 43.4
2045 Male, age 76, both hemispheres 34.9
Hippocampus, CA2
nTPM: 55.1
1963 Male, age 80, left hemisphere 74.7
2437 Female, age 94, left hemisphere 59.6
2249 Male, age 74, both hemispheres 59.2
2113 Female, age 91, right hemisphere 51.6
1940 Female, age 85, left hemisphere 47.1
1892 Male, age 76, both hemispheres 38.2
Hippocampus, CA3
nTPM: 43.8
1891 Female, age 85, both hemispheres 68.0
1867 Male, age 76, both hemispheres 54.9
2436 Male, age 74, both hemispheres 43.5
2620 Female, age 94, left hemisphere 33.4
2137 Male, age 80, left hemisphere 31.8
2861 Female, age 67, both hemispheres 31.1
Parahippocampal cortex
nTPM: 45.0
2532 Female, age 72, left hemisphere 62.0
2692 Male, age 74, both hemispheres 60.7
2018 Male, age 76, both hemispheres 53.5
1990 Female, age 91, right hemisphere 48.5
2245 Female, age 91, both hemispheres 44.0
1850 Male, age 80, both hemispheres 42.7
1933 Female, age 85, both hemispheres 41.6
2693 Female, age 94, both hemispheres 35.8
2250 Female, age 67, right hemisphere 34.0
2622 Female, age 67, right hemisphere 27.2
Perirhinal gyrus
nTPM: 34.5
2848 Male, age 76, right hemisphere 38.5
2521 Female, age 94, right hemisphere 38.0
1794 Male, age 80, right hemisphere 35.6
1847 Female, age 91, left hemisphere 32.0
1841 Female, age 85, right hemisphere 28.3
Subiculum
nTPM: 72.1
2042 Male, age 76, both hemispheres 105.5
1901 Male, age 80, both hemispheres 81.3
2438 Female, age 94, left hemisphere 69.3
1977 Female, age 85, both hemispheres 63.9
2619 Male, age 74, both hemispheres 56.4
2729 Female, age 91, right hemisphere 55.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 61.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 61.5
Samples: 197

Max nTPM: 227.5
Min nTPM: 12.2
Std nTPM: 33.2
Median nTPM: 52.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 227.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 165.8
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 156.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 142.0
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 133.7
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 133.0
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 131.5
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 130.8
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 127.2
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 126.9
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 126.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 65.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 65.4
FF:10153-102I9 76 years, female 76.9
FF:10169-103B7 60 years, female 54.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 52.3
Pig sample Sample description nTPM
Subiculum
nTPM: 40.1
Samples: 4

Max nTPM: 44.4
Min nTPM: 36.0
Sample A Female 44.4
Sample B Female 40.7
Sample C Male 36.0
Sample D Male 39.2
Dorsal hippocampus
nTPM: 52.3
Samples: 4

Max nTPM: 69.8
Min nTPM: 29.7
Sample A Female 67.3
Sample B Female 42.5
Sample C Male 69.8
Sample D Male 29.7
Entorhinal cortex
nTPM: 33.2
Samples: 4

Max nTPM: 39.6
Min nTPM: 26.9
Sample A Female 28.8
Sample B Female 39.6
Sample C Male 37.4
Sample D Male 26.9
Ventral hippocampus
nTPM: 45.1
Samples: 4

Max nTPM: 49.7
Min nTPM: 34.8
Sample A Female 46.8
Sample B Female 34.8
Sample C Male 49.2
Sample D Male 49.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 56.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 39.2
Samples: 4

Max nTPM: 44.2
Min nTPM: 33.9
Sample A Male 44.2
Sample B Male 35.7
Sample C Female 42.8
Sample D Female 33.9
Hippocampal formation
nTPM: 56.0
Samples: 4

Max nTPM: 74.9
Min nTPM: 44.5
Sample A Male 44.5
Sample B Male 46.7
Sample C Female 74.9
Sample D Female 58.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.6
68341597 Antisense, RP_041207_01_G12, Mouse strain C57BL/6J (56 days, male) 2.6

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