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RBM26
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                                  • RBM26
                                  BRAIN THALAMUS Show tissue menu
                                  AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
                                  MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
                                  ANTIBODIES
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                                  VALIDATION
                                  Brain proteome
                                  Thalamus
                                  THALAMUS - Expression summary
                                  Protein expressioni

                                  On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

                                  Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

                                  If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

                                  No data
                                  RNA expressioni

                                  A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

                                  The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

                                  Scroll down to view mRNA expression data in more detail.
                                  HPA Brain:48.4 nTPM
                                  FANTOM5:50.3 Scaled Tags Per Million
                                  Pig:35.0 nTPM
                                  Mouse:22.8 nTPM
                                  Allen mouse:3.1 Expression energy

                                  THALAMUS - HPA Brain RNA-seq
                                  Max nTPM 48.4
                                  Sample id Sample description nTPM
                                  Anterior thalamic nucleus, ventral
                                  nTPM: 43.5
                                  2396 Male, age 61, right hemisphere 45.3
                                  2497 Male, age 66, unknown 43.4
                                  2032 Female, age 42, unknown 41.7
                                  Centromedial thalamic nucleus
                                  nTPM: 48.4
                                  2279 Female, age 85, left hemisphere 54.0
                                  2401 Male, age 76, right hemisphere 42.7
                                  Habenula
                                  nTPM: 40.2
                                  2203 Male, age 61, left hemisphere 43.3
                                  1957 Male, age 80, both hemispheres 42.7
                                  2252 Male, age 62, unknown 39.0
                                  2276 Male, age 66, unknown 35.7
                                  Lateral geniculate body
                                  nTPM: 43.6
                                  2575 Female, age 94, right hemisphere 50.4
                                  2399 Male, age 61, left hemisphere 47.3
                                  1953 Male, age 62, unknown 45.1
                                  2659 Male, age 66, unknown 42.9
                                  2841 Male, age 80, both hemispheres 42.7
                                  2035 Female, age 72, unknown 41.5
                                  2857 Male, age 74, right hemisphere 39.8
                                  2106 Female, age 67, right hemisphere 39.3
                                  Lateral thalamic nuclei
                                  nTPM: 43.5
                                  2765 Female, age 67, both hemispheres 47.9
                                  2573 Female, age 94, left hemisphere 45.0
                                  2577 Male, age 74, both hemispheres 43.2
                                  2661 Female, age 72, unknown 41.1
                                  1903 Male, age 76, left hemisphere 40.1
                                  Medial dorsal thalamic nucleus
                                  nTPM: 40.1
                                  2660 Female, age 72, unknown 46.0
                                  2402 Female, age 67, both hemispheres 45.2
                                  2283 Male, age 80, right hemisphere 42.9
                                  2498 Male, age 66, unknown 41.4
                                  2026 Male, age 62, unknown 39.6
                                  2039 Female, age 72, unknown 39.6
                                  1859 Male, age 76, both hemispheres 39.0
                                  1930 Female, age 42, unknown 38.8
                                  2576 Male, age 74, both hemispheres 38.4
                                  1971 Male, age 61, right hemisphere 38.2
                                  1810 Male, age 48, unknown 38.1
                                  2492 Male, age 75, right hemisphere 37.5
                                  2572 Female, age 94, right hemisphere 36.9
                                  Medial geniculate body
                                  nTPM: 43.0
                                  1811 Female, age 42, unknown 46.4
                                  2049 Male, age 76, both hemispheres 45.6
                                  2217 Female, age 72, unknown 44.5
                                  2207 Male, age 80, right hemisphere 44.0
                                  2650 Female, age 94, left hemisphere 41.2
                                  2657 Male, age 74, right hemisphere 40.5
                                  2571 Male, age 75, right hemisphere 39.1
                                  Nucleus reuniens
                                  nTPM: 45.9
                                  2210 Female, age 85, left hemisphere 51.5
                                  2205 Male, age 80, left hemisphere 44.3
                                  2212 Female, age 67, left hemisphere 41.9
                                  Nucleus rhomboideus
                                  nTPM: 45.3
                                  2280 Female, age 85, left hemisphere 49.3
                                  2213 Female, age 67, left hemisphere 45.6
                                  2206 Male, age 80, both hemispheres 41.0
                                  Posterior thalamic nucleus
                                  nTPM: 37.3
                                  2495 Female, age 67, right hemisphere 43.5
                                  2649 Female, age 94, both hemispheres 36.5
                                  2655 Male, age 74, right hemisphere 34.8
                                  2266 Male, age 76, right hemisphere 34.5
                                  Pulvinar
                                  nTPM: 42.8
                                  2724 Male, age 74, right hemisphere 48.3
                                  2398 Male, age 61, left hemisphere 46.6
                                  1929 Male, age 48, unknown 43.9
                                  2499 Male, age 66, unknown 43.3
                                  2496 Female, age 67, right hemisphere 41.7
                                  2582 Female, age 72, unknown 41.3
                                  1899 Female, age 42, unknown 41.0
                                  1932 Male, age 80, right hemisphere 40.7
                                  1972 Male, age 62, unknown 40.6
                                  2214 Male, age 76, right hemisphere 40.5
                                  Subthalamic nucleus
                                  nTPM: 43.1
                                  2282 Male, age 61, both hemispheres 46.1
                                  2658 Male, age 74, both hemispheres 44.3
                                  2216 Male, age 48, unknown 43.6
                                  2124 Male, age 62, unknown 43.4
                                  2275 Male, age 66, unknown 43.0
                                  2779 Female, age 42, unknown 42.7
                                  2406 Female, age 72, unknown 41.8
                                  2056 Female, age 72, unknown 40.1
                                  Ventral posterolateral thalamic nucleus
                                  nTPM: 42.1
                                  2397 Male, age 61, right hemisphere 45.6
                                  2197 Male, age 80, both hemispheres 43.7
                                  2570 Male, age 75, right hemisphere 43.1
                                  2581 Female, age 72, unknown 42.9
                                  2578 Male, age 74, both hemispheres 41.8
                                  2740 Male, age 76, right hemisphere 35.6
                                  Ventral posteromedial thalamic nucleus
                                  nTPM: 40.5
                                  2127 Male, age 76, right hemisphere 43.3
                                  2202 Male, age 61, left hemisphere 42.0
                                  2653 Male, age 74, both hemispheres 40.2
                                  2281 Male, age 75, right hemisphere 39.6
                                  2758 Male, age 80, both hemispheres 37.6
                                  Ventral thalamic nuclei
                                  nTPM: 42.4
                                  2652 Male, age 74, left hemisphere 45.4
                                  2580 Male, age 66, unknown 44.8
                                  2285 Male, age 62, unknown 43.7
                                  1845 Male, age 48, unknown 42.7
                                  2204 Male, age 80, both hemispheres 42.0
                                  1912 Female, age 42, unknown 40.9
                                  2858 Female, age 72, unknown 40.8
                                  1860 Male, age 76, both hemispheres 40.7
                                  2291 Female, age 72, unknown 40.6
                                  Zona incerta
                                  nTPM: 48.3
                                  2403 Male, age 62, unknown 54.4
                                  2215 Male, age 66, unknown 49.2
                                  2663 Female, age 72, unknown 47.6
                                  2822 Male, age 74, right hemisphere 47.0
                                  2208 Male, age 80, right hemisphere 43.1

                                  THALAMUS - FANTOM5 CAGEi

                                  RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

                                  Max Scaled Tags Per Million 50.3
                                  FANTOM5 sample id Sample description Scaled Tags Per Million
                                  Thalamus
                                  Scaled Tags Per Million: 50.3
                                  FF:10154-103A1 76 years, female 50.3

                                  THALAMUS - Pig RNA-seqi

                                  RNA-seq data obtained from pig brain is reported as nTPM .

                                  Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
                                  Average nTPM 35.0
                                  Pig sample Sample description nTPM
                                  33.334.436.131.639.405101520253035
                                  33.334.436.131.639.405101520253035
                                  Thalamus
                                  nTPM: 35.0
                                  Samples: 4

                                  Max nTPM: 39.4
                                  Min nTPM: 31.6
                                  Sample A Female 31.6
                                  Sample B Female 35.0
                                  Sample C Male 33.8
                                  Sample D Male 39.4

                                  THALAMUS - Mouse RNA-seqi

                                  RNA-seq data obtained from mouse brain is reported as nTPM .

                                  Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
                                  Average nTPM 22.8
                                  Mouse sample Sample description nTPM
                                  22.322.423.022.122.5024681012141618202224
                                  22.322.423.022.122.5024681012141618202224
                                  Thalamus
                                  nTPM: 22.9
                                  Samples: 4

                                  Max nTPM: 24.5
                                  Min nTPM: 22.1
                                  Sample A Male 22.3
                                  Sample B Male 22.5
                                  Sample C Female 22.1
                                  Sample D Female 24.5

                                  THALAMUS - Allen Mouse ISHi

                                  In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

                                  Max Expression energy 3.1
                                  Allen experiment id Experiment description Expression energy
                                  Thalamus
                                  Expression energy: 3.1
                                  70474839 Antisense, RP_050623_01_B04, Mouse strain C57BL/6J (56 days, male) 3.1

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