HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:46.9 nTPM
HPA Brain:60.5 nTPM
GTEx:46.9 nTPM
FANTOM5:38.3 Scaled Tags Per Million
Pig:47.0 nTPM
Mouse:158.5 nTPM
Allen mouse:15.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041177
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 60.5
Sample id Sample description nTPM
Hippocampus
nTPM: 51.6
2621 Female, age 67, right hemisphere 73.5
1898 Male, age 80, left hemisphere 67.9
2148 Female, age 91, left hemisphere 50.7
1855 Male, age 76, left hemisphere 46.0
1911 Female, age 85, right hemisphere 38.9
2529 Female, age 94, left hemisphere 32.5
Dentate gyrus
nTPM: 45.5
1927 Female, age 91, both hemispheres 58.1
2530 Female, age 94, left hemisphere 46.7
2010 Male, age 76, both hemispheres 45.6
2531 Female, age 67, both hemispheres 45.4
2246 Female, age 85, both hemispheres 38.9
2528 Male, age 74, both hemispheres 38.3
Entorhinal gyrus
nTPM: 48.8
2613 Female, age 94, left hemisphere 93.2
2764 Male, age 80, right hemisphere 52.9
1938 Female, age 85, left hemisphere 42.1
1787 Male, age 76, left hemisphere 40.0
2686 Male, age 75, right hemisphere 38.0
2117 Female, age 91, right hemisphere 26.3
Hippocampus, CA1
nTPM: 60.5
2749 Male, age 80, left hemisphere 123.8
2527 Male, age 74, both hemispheres 62.9
1873 Female, age 85, both hemispheres 56.2
2082 Female, age 91, right hemisphere 33.8
2045 Male, age 76, both hemispheres 25.8
Hippocampus, CA2
nTPM: 51.0
1963 Male, age 80, left hemisphere 81.0
1892 Male, age 76, both hemispheres 63.6
2249 Male, age 74, both hemispheres 48.5
2437 Female, age 94, left hemisphere 46.0
2113 Female, age 91, right hemisphere 35.6
1940 Female, age 85, left hemisphere 31.5
Hippocampus, CA3
nTPM: 56.8
2137 Male, age 80, left hemisphere 107.9
2861 Female, age 67, both hemispheres 64.0
1867 Male, age 76, both hemispheres 50.2
2620 Female, age 94, left hemisphere 47.1
2436 Male, age 74, both hemispheres 39.9
1891 Female, age 85, both hemispheres 31.3
Parahippocampal cortex
nTPM: 47.8
2245 Female, age 91, both hemispheres 70.6
2693 Female, age 94, both hemispheres 59.3
1850 Male, age 80, both hemispheres 55.2
2622 Female, age 67, right hemisphere 50.8
1990 Female, age 91, right hemisphere 48.2
2532 Female, age 72, left hemisphere 44.6
2250 Female, age 67, right hemisphere 43.7
2692 Male, age 74, both hemispheres 37.8
1933 Female, age 85, both hemispheres 36.0
2018 Male, age 76, both hemispheres 32.3
Perirhinal gyrus
nTPM: 51.6
1847 Female, age 91, left hemisphere 66.2
2521 Female, age 94, right hemisphere 62.4
1794 Male, age 80, right hemisphere 51.7
1841 Female, age 85, right hemisphere 43.8
2848 Male, age 76, right hemisphere 34.1
Subiculum
nTPM: 42.3
1901 Male, age 80, both hemispheres 63.1
2619 Male, age 74, both hemispheres 42.9
1977 Female, age 85, both hemispheres 42.7
2438 Female, age 94, left hemisphere 38.8
2042 Male, age 76, both hemispheres 33.9
2729 Female, age 91, right hemisphere 32.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 46.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 46.9
Samples: 197

Max nTPM: 127.8
Min nTPM: 3.6
Std nTPM: 28.9
Median nTPM: 42.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 127.8
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 124.9
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 119.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 112.4
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 109.5
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 107.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 107.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 106.1
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 105.5
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 105.1
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 103.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 38.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 38.3
FF:10169-103B7 60 years, female 49.8
FF:10153-102I9 76 years, female 26.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 47.0
Pig sample Sample description nTPM
Subiculum
nTPM: 32.5
Samples: 4

Max nTPM: 43.4
Min nTPM: 28.1
Sample A Female 43.4
Sample B Female 29.8
Sample C Male 28.8
Sample D Male 28.1
Dorsal hippocampus
nTPM: 47.0
Samples: 4

Max nTPM: 59.4
Min nTPM: 31.3
Sample A Female 59.4
Sample B Female 58.2
Sample C Male 31.3
Sample D Male 39.1
Entorhinal cortex
nTPM: 35.7
Samples: 4

Max nTPM: 37.5
Min nTPM: 32.4
Sample A Female 32.4
Sample B Female 36.3
Sample C Male 37.5
Sample D Male 36.7
Ventral hippocampus
nTPM: 38.4
Samples: 4

Max nTPM: 64.7
Min nTPM: 24.7
Sample A Female 27.1
Sample B Female 24.7
Sample C Male 37.1
Sample D Male 64.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 158.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 158.5
Samples: 4

Max nTPM: 174.0
Min nTPM: 144.5
Sample A Male 144.5
Sample B Male 164.7
Sample C Female 150.9
Sample D Female 174.0
Hippocampal formation
nTPM: 135.8
Samples: 4

Max nTPM: 146.4
Min nTPM: 126.7
Sample A Male 140.0
Sample B Male 129.9
Sample C Female 146.4
Sample D Female 126.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 15.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.7
69080008 Antisense, RP_050324_01_C08, Mouse strain C57BL/6J (56 days, male) 15.7

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