We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
CMTM3
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Cluster
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Interacting gene
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • TISSUE CELL

  • PATHOLOGY

  • DISEASE

  • IMMUNE

  • BLOOD

  • SUBCELL

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • CMTM3
IMMUNE CELL MONOCYTES Show tissue menu
B-CELLS DENDRITIC CELLS GRANULOCYTES MONOCYTES NK-CELLS PROGENITORS T-CELLS TOTAL PBMC
Immune cell proteome
Monocytes
MONOCYTES - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
HPA:14.2 nTPM
Monaco:95.5 nTPM
Schmiedel:123.1 TPM

MONOCYTES - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM 14.2
HPA sample nTPM
Classical monocyte
nTPM: 14.2
Samples: 6

Max nTPM: 20.2
Min nTPM: 10.1
P10809_1003 10.1
P10809_1020 16.1
P10809_1039 20.2
P10809_1058 13.2
P10809_1080 10.9
P10809_1107 14.9
Intermediate monocyte
nTPM: 14.0
Samples: 6

Max nTPM: 21.6
Min nTPM: 9.2
P10809_1004 10.2
P10809_1023 9.2
P10809_1042 21.6
P10809_1061 20.2
P10809_1081 12.5
P10809_1108 10.0
Non-classical monocyte
nTPM: 9.0
Samples: 5

Max nTPM: 11.3
Min nTPM: 6.0
P10809_1005 11.3
P10809_1053 9.4
P10809_1072 10.8
P10809_1082 6.0
P10809_1109 7.4

MONOCYTES - Monaco RNA-seqi

RNA-Seq data generated by Monaco et al is reported as average nTPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max nTPM 95.5
Monaco sample nTPM
Classical monocyte
nTPM: 95.5
Samples: 4

Max nTPM: 109.2
Min nTPM: 83.8
RHH5313_R3680 109.2
RHH5221_R3593 99.5
RHH5250_R3622 83.8
RHH5279_R3651 89.5
Intermediate monocyte
nTPM: 59.4
Samples: 4

Max nTPM: 87.0
Min nTPM: 37.8
RHH5314_R3681 87.0
RHH5222_R3594 37.8
RHH5251_R3623 58.6
RHH5280_R3652 54.2
Non-classical monocyte
nTPM: 41.9
Samples: 4

Max nTPM: 61.5
Min nTPM: 20.0
RHH5315_R3682 61.5
RHH5223_R3595 20.0
RHH5252_R3624 33.2
RHH5281_R3653 53.0

MONOCYTES - Schmiedel RNA-seqi

RNA-Seq data generated by Schmiedel et al is reported as average TPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.

Max TPM 123.1
Schmiedel sample id TPM
Classical monocyte
TPM: 123.1
Samples: 91

Max TPM: 159.2
Min TPM: 79.6
MONOCYTES_1 159.2
MONOCYTES_2 154.9
MONOCYTES_3 153.2
MONOCYTES_4 151.3
MONOCYTES_5 150.7
MONOCYTES_6 146.3
MONOCYTES_7 145.6
MONOCYTES_8 145.1
MONOCYTES_9 143.8
MONOCYTES_10 142.7
MONOCYTES_11 141.6
MONOCYTES_12 141.4
MONOCYTES_13 140.7
MONOCYTES_14 140.2
MONOCYTES_15 140.2
MONOCYTES_16 140.1
MONOCYTES_17 139.0
MONOCYTES_18 138.4
MONOCYTES_19 137.6
MONOCYTES_20 136.5
MONOCYTES_21 135.9
MONOCYTES_22 135.9
MONOCYTES_23 135.6
MONOCYTES_24 134.3
MONOCYTES_25 134.2
MONOCYTES_26 133.1
MONOCYTES_27 132.7
MONOCYTES_28 132.0
MONOCYTES_29 131.6
MONOCYTES_30 131.4
MONOCYTES_31 130.8
MONOCYTES_32 130.6
MONOCYTES_33 130.4
MONOCYTES_34 130.2
MONOCYTES_35 130.0
MONOCYTES_36 129.6
MONOCYTES_37 128.4
MONOCYTES_38 128.1
MONOCYTES_39 127.8
MONOCYTES_40 127.7
MONOCYTES_41 127.4
MONOCYTES_42 126.4
MONOCYTES_43 126.1
MONOCYTES_44 125.5
MONOCYTES_45 125.3
MONOCYTES_46 123.5
MONOCYTES_47 122.8
MONOCYTES_48 122.7
MONOCYTES_49 121.7
MONOCYTES_50 121.1
MONOCYTES_51 120.7
MONOCYTES_52 120.6
MONOCYTES_53 120.1
MONOCYTES_54 119.3
MONOCYTES_55 117.5
MONOCYTES_56 117.4
MONOCYTES_57 117.2
MONOCYTES_58 115.9
MONOCYTES_59 115.8
MONOCYTES_60 114.5
MONOCYTES_61 114.0
MONOCYTES_62 114.0
MONOCYTES_63 112.9
MONOCYTES_64 112.8
MONOCYTES_65 112.0
MONOCYTES_66 112.0
MONOCYTES_67 111.3
MONOCYTES_68 111.2
MONOCYTES_69 111.1
MONOCYTES_70 110.3
MONOCYTES_71 110.1
MONOCYTES_72 109.5
MONOCYTES_73 109.0
MONOCYTES_74 108.2
MONOCYTES_75 107.7
MONOCYTES_76 107.2
MONOCYTES_77 107.0
MONOCYTES_78 106.1
MONOCYTES_79 106.1
MONOCYTES_80 105.7
MONOCYTES_81 105.2
MONOCYTES_82 104.9
MONOCYTES_83 103.5
MONOCYTES_84 103.3
MONOCYTES_85 101.7
MONOCYTES_86 99.3
MONOCYTES_87 96.5
MONOCYTES_88 95.3
MONOCYTES_89 95.2
MONOCYTES_90 83.2
MONOCYTES_91 79.6
Show allShow less
Non-classical monocyte
TPM: 55.9
Samples: 90

Max TPM: 98.9
Min TPM: 33.9
M2_1 98.9
M2_2 77.3
M2_3 76.5
M2_4 75.1
M2_5 73.4
M2_6 70.7
M2_7 70.6
M2_8 70.4
M2_9 68.2
M2_10 66.8
M2_11 66.2
M2_12 66.0
M2_13 65.8
M2_14 65.4
M2_15 65.1
M2_16 65.0
M2_17 64.9
M2_18 64.0
M2_19 63.7
M2_20 63.6
M2_21 63.4
M2_22 63.2
M2_23 62.8
M2_24 62.6
M2_25 62.5
M2_26 62.4
M2_27 61.7
M2_28 61.5
M2_29 61.3
M2_30 61.2
M2_31 60.7
M2_32 60.5
M2_33 60.4
M2_34 60.1
M2_35 59.6
M2_36 59.5
M2_37 59.1
M2_38 59.1
M2_39 58.4
M2_40 58.4
M2_41 58.2
M2_42 57.8
M2_43 56.8
M2_44 56.0
M2_45 55.9
M2_46 55.7
M2_47 55.6
M2_48 55.5
M2_49 54.1
M2_50 53.9
M2_51 53.7
M2_52 53.6
M2_53 53.2
M2_54 53.1
M2_55 51.9
M2_56 51.6
M2_57 51.1
M2_58 50.6
M2_59 50.6
M2_60 50.4
M2_61 50.1
M2_62 49.9
M2_63 49.7
M2_64 49.5
M2_65 48.8
M2_66 48.5
M2_67 48.3
M2_68 48.2
M2_69 47.9
M2_70 47.1
M2_71 47.0
M2_72 46.7
M2_73 46.7
M2_74 46.3
M2_75 46.1
M2_76 45.9
M2_77 45.8
M2_78 45.4
M2_79 45.1
M2_80 42.7
M2_81 41.9
M2_82 41.5
M2_83 40.9
M2_84 40.4
M2_85 39.4
M2_86 39.2
M2_87 39.1
M2_88 38.5
M2_89 34.9
M2_90 33.9
Show allShow less

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org