HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:179.7 nTPM
HPA Brain:109.9 nTPM
GTEx:179.7 nTPM
FANTOM5:235.9 Scaled Tags Per Million
Pig:149.6 nTPM
Mouse:260.0 nTPM
Allen mouse:19.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA073189
Glial cells Medium
Neuronal cells High


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 109.9
Sample id Sample description nTPM
Hippocampus
nTPM: 102.5
1898 Male, age 80, left hemisphere 123.9
2621 Female, age 67, right hemisphere 112.3
2529 Female, age 94, left hemisphere 101.9
1855 Male, age 76, left hemisphere 100.2
1911 Female, age 85, right hemisphere 92.9
2148 Female, age 91, left hemisphere 83.6
Dentate gyrus
nTPM: 94.8
2530 Female, age 94, left hemisphere 107.3
1927 Female, age 91, both hemispheres 101.7
2246 Female, age 85, both hemispheres 101.0
2010 Male, age 76, both hemispheres 96.4
2531 Female, age 67, both hemispheres 90.2
2528 Male, age 74, both hemispheres 71.9
Entorhinal gyrus
nTPM: 87.1
2764 Male, age 80, right hemisphere 103.6
1938 Female, age 85, left hemisphere 95.4
1787 Male, age 76, left hemisphere 90.4
2117 Female, age 91, right hemisphere 88.0
2613 Female, age 94, left hemisphere 75.3
2686 Male, age 75, right hemisphere 70.0
Hippocampus, CA1
nTPM: 109.9
2749 Male, age 80, left hemisphere 161.9
2527 Male, age 74, both hemispheres 116.2
1873 Female, age 85, both hemispheres 107.8
2045 Male, age 76, both hemispheres 83.9
2082 Female, age 91, right hemisphere 79.6
Hippocampus, CA2
nTPM: 101.0
1892 Male, age 76, both hemispheres 117.6
1963 Male, age 80, left hemisphere 108.7
2437 Female, age 94, left hemisphere 108.6
2249 Male, age 74, both hemispheres 103.8
1940 Female, age 85, left hemisphere 87.3
2113 Female, age 91, right hemisphere 80.0
Hippocampus, CA3
nTPM: 102.0
2137 Male, age 80, left hemisphere 124.5
2436 Male, age 74, both hemispheres 112.9
1867 Male, age 76, both hemispheres 104.7
2620 Female, age 94, left hemisphere 94.0
1891 Female, age 85, both hemispheres 91.7
2861 Female, age 67, both hemispheres 84.2
Parahippocampal cortex
nTPM: 91.2
2245 Female, age 91, both hemispheres 110.3
2250 Female, age 67, right hemisphere 104.3
1850 Male, age 80, both hemispheres 104.2
2532 Female, age 72, left hemisphere 98.9
1990 Female, age 91, right hemisphere 95.0
1933 Female, age 85, both hemispheres 90.5
2692 Male, age 74, both hemispheres 79.2
2018 Male, age 76, both hemispheres 78.7
2622 Female, age 67, right hemisphere 75.7
2693 Female, age 94, both hemispheres 74.8
Perirhinal gyrus
nTPM: 102.5
1847 Female, age 91, left hemisphere 121.3
1794 Male, age 80, right hemisphere 118.9
1841 Female, age 85, right hemisphere 101.5
2521 Female, age 94, right hemisphere 88.4
2848 Male, age 76, right hemisphere 82.3
Subiculum
nTPM: 99.8
2438 Female, age 94, left hemisphere 122.0
1901 Male, age 80, both hemispheres 111.6
1977 Female, age 85, both hemispheres 100.7
2619 Male, age 74, both hemispheres 96.8
2042 Male, age 76, both hemispheres 95.7
2729 Female, age 91, right hemisphere 72.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 179.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 179.7
Samples: 197

Max nTPM: 400.2
Min nTPM: 71.4
Std nTPM: 46.3
Median nTPM: 174.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 400.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 323.1
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 308.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 306.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 298.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 292.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 288.5
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 287.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 276.0
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 267.0
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 265.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 235.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 235.9
FF:10169-103B7 60 years, female 311.5
FF:10153-102I9 76 years, female 160.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 149.6
Pig sample Sample description nTPM
Subiculum
nTPM: 118.2
Samples: 4

Max nTPM: 160.0
Min nTPM: 99.2
Sample A Female 160.0
Sample B Female 107.6
Sample C Male 99.2
Sample D Male 105.9
Dorsal hippocampus
nTPM: 149.6
Samples: 4

Max nTPM: 195.6
Min nTPM: 114.9
Sample A Female 195.6
Sample B Female 137.4
Sample C Male 150.5
Sample D Male 114.9
Entorhinal cortex
nTPM: 123.7
Samples: 4

Max nTPM: 144.8
Min nTPM: 101.6
Sample A Female 132.9
Sample B Female 144.8
Sample C Male 115.5
Sample D Male 101.6
Ventral hippocampus
nTPM: 136.4
Samples: 4

Max nTPM: 149.4
Min nTPM: 101.7
Sample A Female 148.8
Sample B Female 101.7
Sample C Male 149.4
Sample D Male 145.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 260.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 235.4
Samples: 4

Max nTPM: 247.6
Min nTPM: 219.7
Sample A Male 229.1
Sample B Male 245.3
Sample C Female 247.6
Sample D Female 219.7
Hippocampal formation
nTPM: 260.1
Samples: 4

Max nTPM: 280.1
Min nTPM: 237.9
Sample A Male 277.1
Sample B Male 245.1
Sample C Female 237.9
Sample D Female 280.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 19.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 19.3
71608213 Antisense, RP_050927_01_B09, Mouse strain C57BL/6J (56 days, male) 19.3

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