HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:30.6 nTPM
HPA Brain:50.3 nTPM
GTEx:30.6 nTPM
FANTOM5:26.0 Scaled Tags Per Million
Pig:26.1 nTPM
Mouse:17.5 nTPM
Allen mouse:8.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA060760
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 50.3
Sample id Sample description nTPM
Hippocampus
nTPM: 45.3
1898 Male, age 80, left hemisphere 49.2
2621 Female, age 67, right hemisphere 48.0
2529 Female, age 94, left hemisphere 46.9
1911 Female, age 85, right hemisphere 43.8
2148 Female, age 91, left hemisphere 43.2
1855 Male, age 76, left hemisphere 40.7
Dentate gyrus
nTPM: 45.8
2530 Female, age 94, left hemisphere 53.5
2531 Female, age 67, both hemispheres 48.6
1927 Female, age 91, both hemispheres 47.0
2010 Male, age 76, both hemispheres 46.9
2246 Female, age 85, both hemispheres 41.3
2528 Male, age 74, both hemispheres 37.2
Entorhinal gyrus
nTPM: 50.3
2686 Male, age 75, right hemisphere 56.7
2613 Female, age 94, left hemisphere 56.5
2764 Male, age 80, right hemisphere 54.9
1938 Female, age 85, left hemisphere 45.3
2117 Female, age 91, right hemisphere 45.0
1787 Male, age 76, left hemisphere 43.6
Hippocampus, CA1
nTPM: 46.2
2749 Male, age 80, left hemisphere 57.9
2082 Female, age 91, right hemisphere 45.6
1873 Female, age 85, both hemispheres 45.2
2527 Male, age 74, both hemispheres 41.8
2045 Male, age 76, both hemispheres 40.6
Hippocampus, CA2
nTPM: 43.3
1963 Male, age 80, left hemisphere 48.0
1892 Male, age 76, both hemispheres 47.2
2113 Female, age 91, right hemisphere 44.7
2437 Female, age 94, left hemisphere 44.0
1940 Female, age 85, left hemisphere 39.7
2249 Male, age 74, both hemispheres 36.5
Hippocampus, CA3
nTPM: 47.6
2620 Female, age 94, left hemisphere 56.9
2137 Male, age 80, left hemisphere 53.4
2861 Female, age 67, both hemispheres 51.8
1867 Male, age 76, both hemispheres 47.7
1891 Female, age 85, both hemispheres 42.1
2436 Male, age 74, both hemispheres 33.7
Parahippocampal cortex
nTPM: 44.8
2622 Female, age 67, right hemisphere 53.7
2245 Female, age 91, both hemispheres 47.7
2692 Male, age 74, both hemispheres 46.8
2532 Female, age 72, left hemisphere 45.9
1850 Male, age 80, both hemispheres 45.3
2018 Male, age 76, both hemispheres 43.8
2693 Female, age 94, both hemispheres 43.5
1990 Female, age 91, right hemisphere 42.8
1933 Female, age 85, both hemispheres 40.7
2250 Female, age 67, right hemisphere 38.1
Perirhinal gyrus
nTPM: 44.8
1794 Male, age 80, right hemisphere 50.3
1847 Female, age 91, left hemisphere 46.7
2848 Male, age 76, right hemisphere 44.6
1841 Female, age 85, right hemisphere 43.3
2521 Female, age 94, right hemisphere 38.8
Subiculum
nTPM: 45.1
2042 Male, age 76, both hemispheres 52.6
1901 Male, age 80, both hemispheres 50.3
1977 Female, age 85, both hemispheres 43.3
2438 Female, age 94, left hemisphere 42.5
2619 Male, age 74, both hemispheres 42.4
2729 Female, age 91, right hemisphere 39.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 30.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 30.6
Samples: 197

Max nTPM: 50.1
Min nTPM: 16.0
Std nTPM: 6.6
Median nTPM: 29.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 50.1
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 50.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 48.9
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 47.4
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 44.7
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 44.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 44.0
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 43.3
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 43.1
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 43.0
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 42.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 26.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 26.0
FF:10169-103B7 60 years, female 29.0
FF:10153-102I9 76 years, female 23.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 26.1
Pig sample Sample description nTPM
Subiculum
nTPM: 24.5
Samples: 4

Max nTPM: 31.4
Min nTPM: 19.8
Sample A Female 31.4
Sample B Female 21.3
Sample C Male 25.3
Sample D Male 19.8
Dorsal hippocampus
nTPM: 26.0
Samples: 4

Max nTPM: 33.4
Min nTPM: 18.4
Sample A Female 33.4
Sample B Female 25.8
Sample C Male 26.3
Sample D Male 18.4
Entorhinal cortex
nTPM: 23.0
Samples: 4

Max nTPM: 26.6
Min nTPM: 19.3
Sample A Female 26.6
Sample B Female 19.3
Sample C Male 24.9
Sample D Male 21.0
Ventral hippocampus
nTPM: 26.1
Samples: 4

Max nTPM: 34.5
Min nTPM: 17.7
Sample A Female 23.7
Sample B Female 17.7
Sample C Male 34.5
Sample D Male 28.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 17.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 16.6
Samples: 4

Max nTPM: 19.2
Min nTPM: 15.0
Sample A Male 15.0
Sample B Male 15.5
Sample C Female 16.7
Sample D Female 19.2
Hippocampal formation
nTPM: 17.5
Samples: 4

Max nTPM: 18.3
Min nTPM: 15.5
Sample A Male 15.5
Sample B Male 18.3
Sample C Female 18.0
Sample D Female 18.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.6
69015518 Antisense, RP_050315_01_B06, Mouse strain C57BL/6J (56 days, male) 8.6

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