HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:19.0 nTPM
HPA Brain:51.6 nTPM
GTEx:19.0 nTPM
FANTOM5:55.0 Scaled Tags Per Million
Pig:17.4 nTPM
Mouse:21.7 nTPM
Allen mouse:6.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA045200
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 51.6
Sample id Sample description nTPM
Hippocampus
nTPM: 42.8
1898 Male, age 80, left hemisphere 49.0
1911 Female, age 85, right hemisphere 42.7
2529 Female, age 94, left hemisphere 42.3
2621 Female, age 67, right hemisphere 42.3
2148 Female, age 91, left hemisphere 41.0
1855 Male, age 76, left hemisphere 39.3
Dentate gyrus
nTPM: 46.5
1927 Female, age 91, both hemispheres 57.2
2010 Male, age 76, both hemispheres 45.1
2531 Female, age 67, both hemispheres 44.7
2246 Female, age 85, both hemispheres 44.2
2530 Female, age 94, left hemisphere 44.0
2528 Male, age 74, both hemispheres 43.9
Entorhinal gyrus
nTPM: 44.4
2764 Male, age 80, right hemisphere 48.5
2613 Female, age 94, left hemisphere 47.7
1938 Female, age 85, left hemisphere 45.0
2686 Male, age 75, right hemisphere 43.5
1787 Male, age 76, left hemisphere 42.2
2117 Female, age 91, right hemisphere 39.6
Hippocampus, CA1
nTPM: 51.6
2749 Male, age 80, left hemisphere 75.7
2082 Female, age 91, right hemisphere 50.5
1873 Female, age 85, both hemispheres 47.3
2527 Male, age 74, both hemispheres 42.8
2045 Male, age 76, both hemispheres 41.9
Hippocampus, CA2
nTPM: 47.2
1963 Male, age 80, left hemisphere 59.1
1892 Male, age 76, both hemispheres 48.3
2113 Female, age 91, right hemisphere 46.6
2437 Female, age 94, left hemisphere 44.4
2249 Male, age 74, both hemispheres 42.9
1940 Female, age 85, left hemisphere 42.0
Hippocampus, CA3
nTPM: 48.1
2137 Male, age 80, left hemisphere 67.7
2436 Male, age 74, both hemispheres 49.3
2620 Female, age 94, left hemisphere 46.2
2861 Female, age 67, both hemispheres 45.9
1867 Male, age 76, both hemispheres 43.3
1891 Female, age 85, both hemispheres 36.3
Parahippocampal cortex
nTPM: 43.6
1933 Female, age 85, both hemispheres 52.7
1850 Male, age 80, both hemispheres 46.7
2532 Female, age 72, left hemisphere 44.8
1990 Female, age 91, right hemisphere 44.5
2250 Female, age 67, right hemisphere 43.1
2622 Female, age 67, right hemisphere 42.3
2018 Male, age 76, both hemispheres 41.8
2692 Male, age 74, both hemispheres 41.6
2245 Female, age 91, both hemispheres 41.1
2693 Female, age 94, both hemispheres 37.8
Perirhinal gyrus
nTPM: 44.9
1847 Female, age 91, left hemisphere 51.5
1794 Male, age 80, right hemisphere 47.1
2848 Male, age 76, right hemisphere 43.7
1841 Female, age 85, right hemisphere 41.6
2521 Female, age 94, right hemisphere 40.6
Subiculum
nTPM: 42.0
2729 Female, age 91, right hemisphere 47.8
1901 Male, age 80, both hemispheres 44.9
1977 Female, age 85, both hemispheres 43.7
2619 Male, age 74, both hemispheres 43.1
2042 Male, age 76, both hemispheres 39.8
2438 Female, age 94, left hemisphere 33.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 19.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.0
Samples: 197

Max nTPM: 36.2
Min nTPM: 8.7
Std nTPM: 5.1
Median nTPM: 19.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 36.2
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 31.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 30.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 30.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 30.1
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 30.0
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 28.9
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 28.8
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 28.8
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 28.5
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 28.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 55.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 55.0
FF:10169-103B7 60 years, female 60.2
FF:10153-102I9 76 years, female 49.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.4
Pig sample Sample description nTPM
Subiculum
nTPM: 16.8
Samples: 4

Max nTPM: 21.0
Min nTPM: 14.8
Sample A Female 21.0
Sample B Female 14.8
Sample C Male 16.3
Sample D Male 15.1
Dorsal hippocampus
nTPM: 16.3
Samples: 4

Max nTPM: 19.9
Min nTPM: 13.9
Sample A Female 19.9
Sample B Female 17.3
Sample C Male 14.0
Sample D Male 13.9
Entorhinal cortex
nTPM: 16.1
Samples: 4

Max nTPM: 16.6
Min nTPM: 15.6
Sample A Female 16.6
Sample B Female 15.6
Sample C Male 16.4
Sample D Male 15.7
Ventral hippocampus
nTPM: 17.4
Samples: 4

Max nTPM: 22.2
Min nTPM: 14.5
Sample A Female 16.5
Sample B Female 14.5
Sample C Male 22.2
Sample D Male 16.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 21.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 21.0
Samples: 4

Max nTPM: 22.2
Min nTPM: 19.9
Sample A Male 20.9
Sample B Male 19.9
Sample C Female 20.8
Sample D Female 22.2
Hippocampal formation
nTPM: 21.7
Samples: 4

Max nTPM: 22.6
Min nTPM: 20.8
Sample A Male 21.4
Sample B Male 21.8
Sample C Female 20.8
Sample D Female 22.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.0
69980178 Antisense, RP_050512_04_A08, Mouse strain C57BL/6J (56 days, male) 6.0

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