HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:19.8 nTPM
HPA Brain:11.4 nTPM
GTEx:19.8 nTPM
FANTOM5:15.6 Scaled Tags Per Million
Pig:33.2 nTPM
Mouse:30.8 nTPM
Allen mouse:6.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA066240
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 11.4
Sample id Sample description nTPM
Hippocampus
nTPM: 10.9
2529 Female, age 94, left hemisphere 13.2
1911 Female, age 85, right hemisphere 12.9
2621 Female, age 67, right hemisphere 12.5
1898 Male, age 80, left hemisphere 11.4
1855 Male, age 76, left hemisphere 8.5
2148 Female, age 91, left hemisphere 6.8
Dentate gyrus
nTPM: 9.4
2530 Female, age 94, left hemisphere 11.3
2528 Male, age 74, both hemispheres 10.1
2246 Female, age 85, both hemispheres 9.5
2010 Male, age 76, both hemispheres 8.9
2531 Female, age 67, both hemispheres 8.8
1927 Female, age 91, both hemispheres 7.4
Entorhinal gyrus
nTPM: 9.2
2686 Male, age 75, right hemisphere 14.6
2117 Female, age 91, right hemisphere 11.8
1787 Male, age 76, left hemisphere 10.4
1938 Female, age 85, left hemisphere 6.7
2764 Male, age 80, right hemisphere 5.9
2613 Female, age 94, left hemisphere 5.7
Hippocampus, CA1
nTPM: 7.8
2527 Male, age 74, both hemispheres 10.8
1873 Female, age 85, both hemispheres 7.2
2749 Male, age 80, left hemisphere 7.2
2045 Male, age 76, both hemispheres 7.1
2082 Female, age 91, right hemisphere 6.7
Hippocampus, CA2
nTPM: 9.3
2437 Female, age 94, left hemisphere 11.4
2249 Male, age 74, both hemispheres 10.9
1963 Male, age 80, left hemisphere 9.9
2113 Female, age 91, right hemisphere 8.7
1892 Male, age 76, both hemispheres 7.8
1940 Female, age 85, left hemisphere 7.2
Hippocampus, CA3
nTPM: 11.4
2436 Male, age 74, both hemispheres 19.3
2861 Female, age 67, both hemispheres 12.7
2137 Male, age 80, left hemisphere 11.9
1867 Male, age 76, both hemispheres 10.5
1891 Female, age 85, both hemispheres 7.9
2620 Female, age 94, left hemisphere 6.0
Parahippocampal cortex
nTPM: 9.1
2018 Male, age 76, both hemispheres 12.4
2250 Female, age 67, right hemisphere 12.0
2693 Female, age 94, both hemispheres 10.8
1990 Female, age 91, right hemisphere 10.0
2245 Female, age 91, both hemispheres 9.7
2622 Female, age 67, right hemisphere 9.3
2532 Female, age 72, left hemisphere 8.7
1933 Female, age 85, both hemispheres 7.5
1850 Male, age 80, both hemispheres 5.6
2692 Male, age 74, both hemispheres 5.1
Perirhinal gyrus
nTPM: 8.9
1841 Female, age 85, right hemisphere 12.4
2521 Female, age 94, right hemisphere 10.8
1794 Male, age 80, right hemisphere 7.7
2848 Male, age 76, right hemisphere 7.0
1847 Female, age 91, left hemisphere 6.7
Subiculum
nTPM: 9.0
2042 Male, age 76, both hemispheres 11.7
2619 Male, age 74, both hemispheres 9.5
2729 Female, age 91, right hemisphere 9.3
1977 Female, age 85, both hemispheres 9.0
1901 Male, age 80, both hemispheres 7.8
2438 Female, age 94, left hemisphere 6.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 19.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.8
Samples: 197

Max nTPM: 168.3
Min nTPM: 3.9
Std nTPM: 17.8
Median nTPM: 15.6
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 168.3
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 130.2
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 85.3
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 83.9
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 63.7
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 62.4
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 59.6
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 53.4
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 53.4
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 49.5
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 40.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 15.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 15.6
FF:10153-102I9 76 years, female 21.9
FF:10169-103B7 60 years, female 9.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 33.2
Pig sample Sample description nTPM
Subiculum
nTPM: 7.9
Samples: 4

Max nTPM: 10.5
Min nTPM: 6.4
Sample A Female 10.5
Sample B Female 6.4
Sample C Male 7.7
Sample D Male 7.0
Dorsal hippocampus
nTPM: 33.2
Samples: 4

Max nTPM: 41.8
Min nTPM: 22.3
Sample A Female 41.8
Sample B Female 41.8
Sample C Male 22.3
Sample D Male 27.0
Entorhinal cortex
nTPM: 13.0
Samples: 4

Max nTPM: 16.2
Min nTPM: 10.0
Sample A Female 14.5
Sample B Female 16.2
Sample C Male 11.1
Sample D Male 10.0
Ventral hippocampus
nTPM: 31.6
Samples: 4

Max nTPM: 92.9
Min nTPM: 8.7
Sample A Female 9.8
Sample B Female 8.7
Sample C Male 15.0
Sample D Male 92.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 30.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 18.2
Samples: 4

Max nTPM: 20.9
Min nTPM: 14.4
Sample A Male 20.9
Sample B Male 19.3
Sample C Female 18.0
Sample D Female 14.4
Hippocampal formation
nTPM: 30.8
Samples: 4

Max nTPM: 40.4
Min nTPM: 24.1
Sample A Male 24.1
Sample B Male 30.4
Sample C Female 40.4
Sample D Female 28.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.5
70431391 Antisense, RP_050614_02_G03, Mouse strain C57BL/6J (56 days, male) 6.5
71924311 Antisense, RP_050614_02_G03, Mouse strain C57BL/6J (56 days, male) 5.4

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