HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:119.5 nTPM
HPA Brain:65.7 nTPM
GTEx:119.5 nTPM
FANTOM5:138.2 Scaled Tags Per Million
Pig:29.6 nTPM
Mouse:9.9 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 65.7
Sample id Sample description nTPM
Hippocampus
nTPM: 55.7
1898 Male, age 80, left hemisphere 72.0
1855 Male, age 76, left hemisphere 60.6
2529 Female, age 94, left hemisphere 57.6
1911 Female, age 85, right hemisphere 48.8
2148 Female, age 91, left hemisphere 48.3
2621 Female, age 67, right hemisphere 47.0
Dentate gyrus
nTPM: 57.9
2010 Male, age 76, both hemispheres 71.3
2530 Female, age 94, left hemisphere 68.5
1927 Female, age 91, both hemispheres 61.3
2528 Male, age 74, both hemispheres 52.7
2246 Female, age 85, both hemispheres 49.6
2531 Female, age 67, both hemispheres 44.0
Entorhinal gyrus
nTPM: 50.8
1938 Female, age 85, left hemisphere 65.6
1787 Male, age 76, left hemisphere 55.9
2117 Female, age 91, right hemisphere 52.1
2764 Male, age 80, right hemisphere 47.3
2613 Female, age 94, left hemisphere 45.0
2686 Male, age 75, right hemisphere 38.9
Hippocampus, CA1
nTPM: 65.7
2749 Male, age 80, left hemisphere 92.7
1873 Female, age 85, both hemispheres 69.0
2527 Male, age 74, both hemispheres 61.4
2045 Male, age 76, both hemispheres 53.0
2082 Female, age 91, right hemisphere 52.1
Hippocampus, CA2
nTPM: 60.0
1963 Male, age 80, left hemisphere 72.2
1892 Male, age 76, both hemispheres 71.6
2249 Male, age 74, both hemispheres 69.6
2437 Female, age 94, left hemisphere 51.4
1940 Female, age 85, left hemisphere 47.7
2113 Female, age 91, right hemisphere 47.7
Hippocampus, CA3
nTPM: 57.8
2137 Male, age 80, left hemisphere 74.7
2436 Male, age 74, both hemispheres 67.6
1867 Male, age 76, both hemispheres 63.9
1891 Female, age 85, both hemispheres 51.6
2861 Female, age 67, both hemispheres 45.9
2620 Female, age 94, left hemisphere 42.8
Parahippocampal cortex
nTPM: 49.7
1850 Male, age 80, both hemispheres 63.2
1933 Female, age 85, both hemispheres 58.6
2245 Female, age 91, both hemispheres 57.0
1990 Female, age 91, right hemisphere 54.0
2250 Female, age 67, right hemisphere 52.5
2018 Male, age 76, both hemispheres 51.6
2693 Female, age 94, both hemispheres 44.6
2532 Female, age 72, left hemisphere 44.3
2692 Male, age 74, both hemispheres 36.6
2622 Female, age 67, right hemisphere 35.1
Perirhinal gyrus
nTPM: 58.4
1847 Female, age 91, left hemisphere 64.6
1794 Male, age 80, right hemisphere 61.1
1841 Female, age 85, right hemisphere 61.1
2521 Female, age 94, right hemisphere 61.1
2848 Male, age 76, right hemisphere 44.3
Subiculum
nTPM: 51.7
1901 Male, age 80, both hemispheres 57.8
2042 Male, age 76, both hemispheres 55.9
2438 Female, age 94, left hemisphere 55.7
1977 Female, age 85, both hemispheres 54.4
2729 Female, age 91, right hemisphere 44.5
2619 Male, age 74, both hemispheres 41.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 119.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 119.5
Samples: 197

Max nTPM: 251.1
Min nTPM: 46.3
Std nTPM: 34.1
Median nTPM: 114.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 251.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 239.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 228.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 228.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 221.4
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 210.3
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 195.8
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 191.8
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 190.6
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 187.0
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 184.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 138.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 138.2
FF:10169-103B7 60 years, female 177.5
FF:10153-102I9 76 years, female 98.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 29.6
Pig sample Sample description nTPM
Subiculum
nTPM: 29.1
Samples: 4

Max nTPM: 33.1
Min nTPM: 26.3
Sample A Female 33.1
Sample B Female 28.0
Sample C Male 26.3
Sample D Male 28.8
Dorsal hippocampus
nTPM: 28.8
Samples: 4

Max nTPM: 35.4
Min nTPM: 23.9
Sample A Female 35.4
Sample B Female 28.8
Sample C Male 27.2
Sample D Male 23.9
Entorhinal cortex
nTPM: 29.6
Samples: 4

Max nTPM: 35.9
Min nTPM: 22.6
Sample A Female 30.4
Sample B Female 35.9
Sample C Male 29.6
Sample D Male 22.6
Ventral hippocampus
nTPM: 25.9
Samples: 4

Max nTPM: 27.5
Min nTPM: 23.3
Sample A Female 27.5
Sample B Female 23.3
Sample C Male 27.3
Sample D Male 25.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 9.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.4
Samples: 4

Max nTPM: 10.0
Min nTPM: 7.9
Sample A Male 7.9
Sample B Male 9.8
Sample C Female 10.0
Sample D Female 9.7
Hippocampal formation
nTPM: 9.9
Samples: 4

Max nTPM: 11.5
Min nTPM: 9.3
Sample A Male 9.4
Sample B Male 9.3
Sample C Female 11.5
Sample D Female 9.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
68795466 Antisense, RP_050118_01_H03, Mouse strain C57BL/6J (56 days, male) 0.5

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