HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:875.1 nTPM
HPA Brain:185.6 nTPM
GTEx:875.1 nTPM
FANTOM5:156.2 Scaled Tags Per Million
Pig:570.8 nTPM
Mouse:654.4 nTPM
Allen mouse:17.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA002734
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 185.6
Sample id Sample description nTPM
Hippocampus
nTPM: 185.6
2529 Female, age 94, left hemisphere 219.6
2621 Female, age 67, right hemisphere 207.8
1911 Female, age 85, right hemisphere 184.2
1898 Male, age 80, left hemisphere 182.9
1855 Male, age 76, left hemisphere 168.6
2148 Female, age 91, left hemisphere 150.4
Dentate gyrus
nTPM: 179.1
2530 Female, age 94, left hemisphere 255.1
2010 Male, age 76, both hemispheres 208.0
2246 Female, age 85, both hemispheres 195.0
2531 Female, age 67, both hemispheres 180.1
1927 Female, age 91, both hemispheres 125.7
2528 Male, age 74, both hemispheres 110.7
Entorhinal gyrus
nTPM: 166.1
2686 Male, age 75, right hemisphere 229.7
2117 Female, age 91, right hemisphere 191.4
1787 Male, age 76, left hemisphere 185.0
1938 Female, age 85, left hemisphere 140.4
2764 Male, age 80, right hemisphere 132.0
2613 Female, age 94, left hemisphere 117.9
Hippocampus, CA1
nTPM: 158.9
2045 Male, age 76, both hemispheres 206.1
1873 Female, age 85, both hemispheres 160.8
2527 Male, age 74, both hemispheres 157.8
2749 Male, age 80, left hemisphere 139.7
2082 Female, age 91, right hemisphere 130.1
Hippocampus, CA2
nTPM: 158.7
1892 Male, age 76, both hemispheres 191.8
1940 Female, age 85, left hemisphere 174.2
2437 Female, age 94, left hemisphere 172.2
1963 Male, age 80, left hemisphere 151.5
2113 Female, age 91, right hemisphere 138.8
2249 Male, age 74, both hemispheres 123.6
Hippocampus, CA3
nTPM: 145.1
1891 Female, age 85, both hemispheres 183.6
1867 Male, age 76, both hemispheres 175.4
2861 Female, age 67, both hemispheres 160.6
2620 Female, age 94, left hemisphere 120.6
2436 Male, age 74, both hemispheres 115.7
2137 Male, age 80, left hemisphere 114.8
Parahippocampal cortex
nTPM: 153.7
2018 Male, age 76, both hemispheres 222.5
2245 Female, age 91, both hemispheres 173.5
2532 Female, age 72, left hemisphere 166.1
1850 Male, age 80, both hemispheres 163.0
2692 Male, age 74, both hemispheres 159.1
2622 Female, age 67, right hemisphere 150.6
1990 Female, age 91, right hemisphere 140.6
1933 Female, age 85, both hemispheres 127.8
2250 Female, age 67, right hemisphere 125.0
2693 Female, age 94, both hemispheres 109.1
Perirhinal gyrus
nTPM: 141.8
1794 Male, age 80, right hemisphere 160.1
2848 Male, age 76, right hemisphere 148.1
1841 Female, age 85, right hemisphere 140.5
1847 Female, age 91, left hemisphere 135.9
2521 Female, age 94, right hemisphere 124.7
Subiculum
nTPM: 178.7
2042 Male, age 76, both hemispheres 229.2
1901 Male, age 80, both hemispheres 195.2
1977 Female, age 85, both hemispheres 182.0
2438 Female, age 94, left hemisphere 178.6
2619 Male, age 74, both hemispheres 158.0
2729 Female, age 91, right hemisphere 129.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 875.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 875.1
Samples: 197

Max nTPM: 2291.5
Min nTPM: 379.5
Std nTPM: 310.3
Median nTPM: 797.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 2291.5
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 1975.5
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 1894.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1796.1
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 1777.3
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 1716.0
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 1713.5
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 1641.4
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 1549.6
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 1528.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 1521.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 156.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 156.2
FF:10169-103B7 60 years, female 255.4
FF:10153-102I9 76 years, female 57.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 570.8
Pig sample Sample description nTPM
Subiculum
nTPM: 466.6
Samples: 4

Max nTPM: 613.2
Min nTPM: 386.3
Sample A Female 613.2
Sample B Female 455.5
Sample C Male 386.3
Sample D Male 411.3
Dorsal hippocampus
nTPM: 570.8
Samples: 4

Max nTPM: 698.3
Min nTPM: 400.8
Sample A Female 698.3
Sample B Female 508.0
Sample C Male 676.0
Sample D Male 400.8
Entorhinal cortex
nTPM: 436.6
Samples: 4

Max nTPM: 526.5
Min nTPM: 326.4
Sample A Female 400.5
Sample B Female 492.8
Sample C Male 526.5
Sample D Male 326.4
Ventral hippocampus
nTPM: 473.6
Samples: 4

Max nTPM: 503.7
Min nTPM: 420.2
Sample A Female 494.4
Sample B Female 420.2
Sample C Male 476.2
Sample D Male 503.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 654.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 636.3
Samples: 4

Max nTPM: 677.4
Min nTPM: 598.4
Sample A Male 639.1
Sample B Male 630.4
Sample C Female 677.4
Sample D Female 598.4
Hippocampal formation
nTPM: 654.4
Samples: 4

Max nTPM: 735.2
Min nTPM: 601.8
Sample A Male 735.2
Sample B Male 601.8
Sample C Female 633.5
Sample D Female 647.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 17.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.6
199144 Antisense, RP_040609_01_B11, Mouse strain C57BL/6J (56 days, male) 17.6
276067 Antisense, RP_040609_01_B11, Mouse strain C57BL/6J (56 days, male) 13.4

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