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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
267.7
nTPM
FANTOM5:
81.9
Scaled Tags Per Million
Pig:
665.8
nTPM
Allen mouse:
10.7
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
267.7
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 251.1
2188
Female, age 91, both hemispheres
320.3
2090
Male, age 80, both hemispheres
265.7
2301
Female, age 85, both hemispheres
218.9
1984
Male, age 76, both hemispheres
199.5
Dorsal cochlear nucleus nTPM: 238.3
2802
Male, age 74, right hemisphere
305.0
2187
Female, age 91, both hemispheres
283.7
2378
Male, age 80, both hemispheres
233.9
2370
Male, age 61, both hemispheres
221.3
2058
Male, age 76, both hemispheres
147.4
Dorsal tegmental nucleus nTPM: 232.9
2083
Male, age 80, both hemispheres
272.4
2326
Male, age 74, both hemispheres
240.3
2358
Male, age 61, both hemispheres
224.6
1936
Male, age 76, left hemisphere
194.4
Dorsolateral tegmental area nTPM: 235.4
2337
Male, age 61, both hemispheres
322.8
2654
Male, age 80, both hemispheres
270.1
2751
Female, age 85, both hemispheres
198.3
2141
Male, age 76, both hemispheres
196.6
2360
Male, age 74, both hemispheres
189.2
Kolliker-Fuse nucleus nTPM: 258.0
2793
Female, age 91, left hemisphere
298.1
2315
Male, age 76, right hemisphere
240.2
2163
Male, age 80, both hemispheres
235.7
Lateral lemniscal nuclei nTPM: 183.6
2169
Male, age 76, both hemispheres
234.3
2746
Female, age 85, left hemisphere
194.8
2453
Male, age 74, right hemisphere
190.7
2320
Female, age 91, left hemisphere
184.5
2036
Male, age 80, both hemispheres
113.6
Lateral parabrachial nucleus nTPM: 267.7
2792
Male, age 76, both hemispheres
338.4
2013
Male, age 80, both hemispheres
282.7
2139
Female, age 85, right hemisphere
260.1
2790
Male, age 61, both hemispheres
189.8
Lateral vestibular nucleus nTPM: 227.8
2311
Male, age 80, both hemispheres
266.0
2184
Male, age 76, both hemispheres
189.6
Locus coeruleus nTPM: 193.2
2720
Male, age 74, both hemispheres
259.8
2162
Male, age 80, both hemispheres
213.6
2788
Male, age 74, unknown
208.8
2123
Female, age 91, both hemispheres
182.5
2317
Female, age 72, unknown
167.1
2014
Male, age 55, unknown
166.9
1980
Male, age 76, both hemispheres
153.6
Medial parabrachial nucleus nTPM: 228.9
2170
Female, age 91, both hemispheres
299.1
2854
Male, age 80, both hemispheres
299.0
2786
Male, age 76, both hemispheres
196.2
2156
Male, age 61, both hemispheres
187.1
2463
Female, age 85, right hemisphere
163.3
Medial periolivary nuclei nTPM: 211.5
2458
Female, age 91, both hemispheres
244.2
2081
Male, age 80, both hemispheres
228.4
2063
Male, age 76, both hemispheres
221.9
2171
Female, age 85, both hemispheres
187.5
2791
Male, age 74, right hemisphere
175.3
Motor facial nucleus nTPM: 213.9
2697
Female, age 85, both hemispheres
278.2
2795
Female, age 91, both hemispheres
251.8
2365
Male, age 74, right hemisphere
228.4
2126
Male, age 61, both hemispheres
200.2
2062
Male, age 76, both hemispheres
165.9
2327
Male, age 80, both hemispheres
159.1
Motor trigeminal nucleus nTPM: 214.5
2335
Male, age 61, both hemispheres
253.4
2321
Female, age 91, both hemispheres
228.1
2309
Male, age 76, both hemispheres
220.7
2560
Male, age 74, both hemispheres
196.3
2079
Male, age 80, both hemispheres
174.1
Nuclei of the trapezoid body nTPM: 185.2
2166
Male, age 80, both hemispheres
225.6
1983
Male, age 76, both hemispheres
220.0
2159
Male, age 61, both hemispheres
183.7
2368
Female, age 91, both hemispheres
166.6
2735
Female, age 85, both hemispheres
130.4
Nucleus raphe magnus nTPM: 203.1
2051
Male, age 76, both hemispheres
251.7
2328
Male, age 80, both hemispheres
209.7
2459
Female, age 91, both hemispheres
208.1
2172
Female, age 85, both hemispheres
188.0
2455
Male, age 74, both hemispheres
183.5
2160
Male, age 61, both hemispheres
177.5
Paramedian reticular nucleus nTPM: 223.2
2052
Male, age 76, both hemispheres
302.7
2050
Female, age 85, both hemispheres
233.8
2313
Male, age 61, both hemispheres
187.2
2057
Male, age 80, both hemispheres
169.0
Pedunculopontine tegmental nucleus nTPM: 256.7
2338
Male, age 61, both hemispheres
338.8
2334
Male, age 80, both hemispheres
256.3
1921
Female, age 85, both hemispheres
175.0
Pontine nuclei nTPM: 206.5
2319
Female, age 91, both hemispheres
243.7
1863
Male, age 55, unknown
222.5
2787
Female, age 85, both hemispheres
219.8
1968
Male, age 76, left hemisphere
214.4
2454
Male, age 74, left hemisphere
205.9
2115
Male, age 80, left hemisphere
199.7
2109
Female, age 72, unknown
198.3
2727
Male, age 61, right hemisphere
147.6
Pontine raphe nucleus nTPM: 189.5
2853
Male, age 76, midline
193.0
2122
Female, age 85, midline
186.0
Posteroventral cochlear nucleus nTPM: 248.0
2341
Male, age 80, both hemispheres
371.0
2135
Female, age 91, both hemispheres
267.8
2371
Male, age 61, both hemispheres
215.2
2070
Male, age 76, both hemispheres
206.3
2752
Female, age 85, both hemispheres
179.7
Principal sensory trigeminal nucleus nTPM: 187.5
2367
Female, age 91, left hemisphere
230.6
2324
Male, age 76, both hemispheres
201.3
2158
Male, age 61, both hemispheres
187.1
2008
Male, age 80, left hemisphere
131.1
Reticular pontine nucleus, caudal nTPM: 225.3
2457
Female, age 91, both hemispheres
274.4
2092
Male, age 76, both hemispheres
241.0
2559
Male, age 74, both hemispheres
217.6
2332
Male, age 80, right hemisphere
168.3
Reticular pontine nucleus, oral nTPM: 238.3
2366
Female, age 91, both hemispheres
287.0
2167
Male, age 76, both hemispheres
253.6
1939
Male, age 80, both hemispheres
232.3
2361
Male, age 74, both hemispheres
224.4
2012
Female, age 85, both hemispheres
194.1
Reticulotegmental nucleus nTPM: 207.1
2322
Female, age 91, both hemispheres
236.3
2452
Male, age 74, both hemispheres
215.5
2333
Male, age 80, both hemispheres
193.1
2325
Male, age 76, both hemispheres
183.5
Spinal trigeminal nucleus, oral nTPM: 197.2
2164
Male, age 80, both hemispheres
251.8
1978
Male, age 76, both hemispheres
187.6
2737
Female, age 85, both hemispheres
152.3
Subcoeruleus area nTPM: 211.3
2369
Female, age 85, left hemisphere
233.1
2451
Male, age 74, both hemispheres
232.7
1958
Male, age 80, both hemispheres
228.2
2089
Male, age 76, left hemisphere
183.3
2323
Female, age 91, left hemisphere
179.2
Superior olive nTPM: 211.4
2561
Female, age 91, both hemispheres
251.1
2020
Male, age 76, both hemispheres
243.5
2364
Male, age 74, right hemisphere
194.4
1875
Female, age 85, both hemispheres
191.8
2329
Male, age 80, right hemisphere
176.1
Ventral periolivary nuclei nTPM: 204.7
2023
Male, age 76, both hemispheres
251.6
2165
Male, age 80, both hemispheres
223.9
2794
Female, age 91, left hemisphere
203.1
2130
Female, age 85, both hemispheres
140.3
Ventrolateral tegmental area, A5 NE cell group nTPM: 235.8
2840
Female, age 85, both hemispheres
291.8
2359
Male, age 61, both hemispheres
262.5
1959
Male, age 76, both hemispheres
236.4
2161
Male, age 80, both hemispheres
234.5
2456
Female, age 91, both hemispheres
204.9
2449
Male, age 74, both hemispheres
184.8
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
665.8
Pig sample
Sample description
nTPM
Pons nTPM: 665.8
Samples: 4
Max nTPM: 788.8
Min nTPM: 489.6
Sample A
Female
634.5
Sample B
Female
489.6
Sample C
Male
788.8
Sample D
Male
750.2
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
