HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:5.3 nTPM
HPA Brain:10.1 nTPM
GTEx:5.3 nTPM
FANTOM5:6.2 Scaled Tags Per Million
Pig:7.7 nTPM
Mouse:0.0 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047433
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 10.1
Sample id Sample description nTPM
Hippocampus
nTPM: 10.1
2148 Female, age 91, left hemisphere 11.7
1898 Male, age 80, left hemisphere 11.0
2529 Female, age 94, left hemisphere 11.0
1911 Female, age 85, right hemisphere 10.4
1855 Male, age 76, left hemisphere 8.7
2621 Female, age 67, right hemisphere 7.9
Dentate gyrus
nTPM: 8.5
2528 Male, age 74, both hemispheres 15.4
2246 Female, age 85, both hemispheres 9.2
1927 Female, age 91, both hemispheres 8.6
2010 Male, age 76, both hemispheres 6.3
2530 Female, age 94, left hemisphere 6.1
2531 Female, age 67, both hemispheres 5.5
Entorhinal gyrus
nTPM: 8.3
2117 Female, age 91, right hemisphere 12.8
1938 Female, age 85, left hemisphere 8.8
1787 Male, age 76, left hemisphere 7.5
2613 Female, age 94, left hemisphere 7.5
2686 Male, age 75, right hemisphere 7.3
2764 Male, age 80, right hemisphere 6.2
Hippocampus, CA1
nTPM: 9.3
2527 Male, age 74, both hemispheres 12.0
1873 Female, age 85, both hemispheres 10.5
2082 Female, age 91, right hemisphere 9.3
2749 Male, age 80, left hemisphere 7.7
2045 Male, age 76, both hemispheres 7.1
Hippocampus, CA2
nTPM: 8.6
2113 Female, age 91, right hemisphere 11.8
2249 Male, age 74, both hemispheres 11.7
1963 Male, age 80, left hemisphere 9.5
1940 Female, age 85, left hemisphere 7.0
2437 Female, age 94, left hemisphere 7.0
1892 Male, age 76, both hemispheres 5.0
Hippocampus, CA3
nTPM: 9.0
2436 Male, age 74, both hemispheres 14.2
1891 Female, age 85, both hemispheres 10.1
2137 Male, age 80, left hemisphere 10.1
1867 Male, age 76, both hemispheres 7.3
2620 Female, age 94, left hemisphere 6.8
2861 Female, age 67, both hemispheres 5.7
Parahippocampal cortex
nTPM: 8.0
2250 Female, age 67, right hemisphere 10.9
2692 Male, age 74, both hemispheres 10.3
2018 Male, age 76, both hemispheres 8.2
1933 Female, age 85, both hemispheres 8.0
2245 Female, age 91, both hemispheres 7.9
1990 Female, age 91, right hemisphere 7.5
1850 Male, age 80, both hemispheres 7.1
2622 Female, age 67, right hemisphere 7.0
2693 Female, age 94, both hemispheres 7.0
2532 Female, age 72, left hemisphere 6.3
Perirhinal gyrus
nTPM: 7.8
1847 Female, age 91, left hemisphere 10.6
1841 Female, age 85, right hemisphere 8.6
1794 Male, age 80, right hemisphere 8.1
2521 Female, age 94, right hemisphere 6.4
2848 Male, age 76, right hemisphere 5.1
Subiculum
nTPM: 9.0
2729 Female, age 91, right hemisphere 13.9
2619 Male, age 74, both hemispheres 11.5
1977 Female, age 85, both hemispheres 8.4
1901 Male, age 80, both hemispheres 7.7
2042 Male, age 76, both hemispheres 6.8
2438 Female, age 94, left hemisphere 6.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 5.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 5.3
Samples: 197

Max nTPM: 26.6
Min nTPM: 0.9
Std nTPM: 3.4
Median nTPM: 4.7
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 26.6
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 20.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 16.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 15.7
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 14.0
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 12.8
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 12.4
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 12.0
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 11.8
GTEX-1BAJH-0011-R1a-SM-7P8SV 70-79 years, male 11.6
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 11.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 6.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 6.2
FF:10153-102I9 76 years, female 7.3
FF:10169-103B7 60 years, female 5.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 7.7
Pig sample Sample description nTPM
Subiculum
nTPM: 7.8
Samples: 4

Max nTPM: 8.8
Min nTPM: 5.9
Sample A Female 5.9
Sample B Female 8.8
Sample C Male 7.7
Sample D Male 8.6
Dorsal hippocampus
nTPM: 7.3
Samples: 4

Max nTPM: 9.9
Min nTPM: 5.5
Sample A Female 5.5
Sample B Female 6.9
Sample C Male 6.8
Sample D Male 9.9
Entorhinal cortex
nTPM: 6.0
Samples: 4

Max nTPM: 7.0
Min nTPM: 5.1
Sample A Female 6.3
Sample B Female 5.1
Sample C Male 5.4
Sample D Male 7.0
Ventral hippocampus
nTPM: 7.5
Samples: 4

Max nTPM: 8.7
Min nTPM: 6.6
Sample A Female 6.6
Sample B Female 8.7
Sample C Male 7.4
Sample D Male 7.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 0.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Male 0.0
Sample B Male 0.0
Sample C Female 0.0
Sample D Female 0.0
Hippocampal formation
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Male 0.0
Sample B Male 0.0
Sample C Female 0.0
Sample D Female 0.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
68076911 Antisense, RP_040929_01_A07, Mouse strain C57BL/6J (56 days, male) 0.0

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