HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:12.5 nTPM
HPA Brain:29.1 nTPM
GTEx:12.5 nTPM
FANTOM5:37.5 Scaled Tags Per Million
Pig:28.2 nTPM
Mouse:53.2 nTPM
Allen mouse:7.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA060302
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 29.1
Sample id Sample description nTPM
Hippocampus
nTPM: 21.0
1898 Male, age 80, left hemisphere 25.8
2148 Female, age 91, left hemisphere 22.7
2621 Female, age 67, right hemisphere 22.2
1855 Male, age 76, left hemisphere 21.3
2529 Female, age 94, left hemisphere 17.7
1911 Female, age 85, right hemisphere 16.3
Dentate gyrus
nTPM: 22.0
2010 Male, age 76, both hemispheres 23.0
1927 Female, age 91, both hemispheres 22.9
2528 Male, age 74, both hemispheres 22.7
2531 Female, age 67, both hemispheres 22.7
2246 Female, age 85, both hemispheres 20.8
2530 Female, age 94, left hemisphere 19.8
Entorhinal gyrus
nTPM: 26.1
2613 Female, age 94, left hemisphere 30.5
2764 Male, age 80, right hemisphere 29.5
1787 Male, age 76, left hemisphere 27.7
1938 Female, age 85, left hemisphere 24.3
2117 Female, age 91, right hemisphere 23.6
2686 Male, age 75, right hemisphere 20.9
Hippocampus, CA1
nTPM: 23.7
2749 Male, age 80, left hemisphere 29.6
2045 Male, age 76, both hemispheres 25.0
2082 Female, age 91, right hemisphere 23.0
2527 Male, age 74, both hemispheres 20.9
1873 Female, age 85, both hemispheres 20.3
Hippocampus, CA2
nTPM: 21.3
1892 Male, age 76, both hemispheres 25.4
1963 Male, age 80, left hemisphere 23.2
1940 Female, age 85, left hemisphere 21.2
2113 Female, age 91, right hemisphere 20.8
2249 Male, age 74, both hemispheres 19.2
2437 Female, age 94, left hemisphere 18.0
Hippocampus, CA3
nTPM: 22.9
1867 Male, age 76, both hemispheres 24.5
2137 Male, age 80, left hemisphere 24.4
2620 Female, age 94, left hemisphere 24.1
2436 Male, age 74, both hemispheres 22.0
1891 Female, age 85, both hemispheres 21.5
2861 Female, age 67, both hemispheres 21.0
Parahippocampal cortex
nTPM: 23.9
1850 Male, age 80, both hemispheres 28.3
1933 Female, age 85, both hemispheres 25.7
2692 Male, age 74, both hemispheres 24.8
2693 Female, age 94, both hemispheres 23.9
2532 Female, age 72, left hemisphere 23.3
1990 Female, age 91, right hemisphere 23.1
2250 Female, age 67, right hemisphere 23.0
2018 Male, age 76, both hemispheres 22.4
2622 Female, age 67, right hemisphere 22.4
2245 Female, age 91, both hemispheres 22.3
Perirhinal gyrus
nTPM: 29.1
1847 Female, age 91, left hemisphere 32.6
1794 Male, age 80, right hemisphere 31.1
2521 Female, age 94, right hemisphere 29.7
2848 Male, age 76, right hemisphere 26.7
1841 Female, age 85, right hemisphere 25.4
Subiculum
nTPM: 21.6
1977 Female, age 85, both hemispheres 25.3
2619 Male, age 74, both hemispheres 24.4
2438 Female, age 94, left hemisphere 22.2
1901 Male, age 80, both hemispheres 21.9
2729 Female, age 91, right hemisphere 21.1
2042 Male, age 76, both hemispheres 14.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.5
Samples: 197

Max nTPM: 21.0
Min nTPM: 4.7
Std nTPM: 3.4
Median nTPM: 12.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 21.0
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 20.6
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 20.3
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 20.1
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 20.0
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 19.5
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 19.1
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 18.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 18.3
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 18.1
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 18.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 37.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 37.5
FF:10153-102I9 76 years, female 41.7
FF:10169-103B7 60 years, female 33.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 28.2
Pig sample Sample description nTPM
Subiculum
nTPM: 25.8
Samples: 4

Max nTPM: 32.5
Min nTPM: 23.1
Sample A Female 32.5
Sample B Female 23.1
Sample C Male 23.2
Sample D Male 24.2
Dorsal hippocampus
nTPM: 28.0
Samples: 4

Max nTPM: 37.6
Min nTPM: 21.3
Sample A Female 37.6
Sample B Female 29.4
Sample C Male 23.5
Sample D Male 21.3
Entorhinal cortex
nTPM: 28.2
Samples: 4

Max nTPM: 29.8
Min nTPM: 25.7
Sample A Female 29.8
Sample B Female 27.6
Sample C Male 29.7
Sample D Male 25.7
Ventral hippocampus
nTPM: 26.1
Samples: 4

Max nTPM: 30.8
Min nTPM: 19.3
Sample A Female 29.3
Sample B Female 19.3
Sample C Male 30.8
Sample D Male 24.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 53.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 45.7
Samples: 4

Max nTPM: 48.2
Min nTPM: 43.3
Sample A Male 43.5
Sample B Male 43.3
Sample C Female 47.7
Sample D Female 48.2
Hippocampal formation
nTPM: 53.2
Samples: 4

Max nTPM: 58.2
Min nTPM: 51.4
Sample A Male 51.7
Sample B Male 51.5
Sample C Female 58.2
Sample D Female 51.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.7
71613677 Antisense, RP_050927_02_E10, Mouse strain C57BL/6J (56 days, male) 7.7

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