HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:12.9 nTPM
HPA Brain:28.9 nTPM
GTEx:12.9 nTPM
FANTOM5:34.3 Scaled Tags Per Million
Pig:39.0 nTPM
Mouse:21.9 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA027995
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 28.9
Sample id Sample description nTPM
Hippocampus
nTPM: 22.1
1898 Male, age 80, left hemisphere 29.4
1855 Male, age 76, left hemisphere 22.5
1911 Female, age 85, right hemisphere 22.3
2529 Female, age 94, left hemisphere 20.4
2621 Female, age 67, right hemisphere 19.3
2148 Female, age 91, left hemisphere 19.1
Dentate gyrus
nTPM: 23.5
2010 Male, age 76, both hemispheres 28.7
1927 Female, age 91, both hemispheres 27.7
2246 Female, age 85, both hemispheres 24.5
2528 Male, age 74, both hemispheres 20.6
2531 Female, age 67, both hemispheres 20.4
2530 Female, age 94, left hemisphere 19.1
Entorhinal gyrus
nTPM: 23.5
1938 Female, age 85, left hemisphere 28.3
2764 Male, age 80, right hemisphere 25.0
2613 Female, age 94, left hemisphere 23.8
1787 Male, age 76, left hemisphere 23.5
2686 Male, age 75, right hemisphere 20.4
2117 Female, age 91, right hemisphere 19.9
Hippocampus, CA1
nTPM: 27.1
2749 Male, age 80, left hemisphere 36.9
2045 Male, age 76, both hemispheres 29.7
1873 Female, age 85, both hemispheres 28.6
2527 Male, age 74, both hemispheres 21.0
2082 Female, age 91, right hemisphere 19.4
Hippocampus, CA2
nTPM: 24.0
1892 Male, age 76, both hemispheres 33.6
1963 Male, age 80, left hemisphere 24.7
2437 Female, age 94, left hemisphere 23.1
2249 Male, age 74, both hemispheres 21.8
2113 Female, age 91, right hemisphere 20.5
1940 Female, age 85, left hemisphere 20.3
Hippocampus, CA3
nTPM: 24.9
2137 Male, age 80, left hemisphere 32.8
1867 Male, age 76, both hemispheres 29.9
2620 Female, age 94, left hemisphere 24.1
1891 Female, age 85, both hemispheres 22.7
2436 Male, age 74, both hemispheres 20.6
2861 Female, age 67, both hemispheres 19.4
Parahippocampal cortex
nTPM: 24.9
2250 Female, age 67, right hemisphere 28.7
1850 Male, age 80, both hemispheres 28.2
2693 Female, age 94, both hemispheres 27.0
1933 Female, age 85, both hemispheres 26.8
1990 Female, age 91, right hemisphere 26.8
2018 Male, age 76, both hemispheres 26.8
2245 Female, age 91, both hemispheres 24.7
2532 Female, age 72, left hemisphere 23.3
2692 Male, age 74, both hemispheres 18.8
2622 Female, age 67, right hemisphere 18.2
Perirhinal gyrus
nTPM: 28.9
1841 Female, age 85, right hemisphere 31.8
1847 Female, age 91, left hemisphere 30.7
2521 Female, age 94, right hemisphere 27.8
2848 Male, age 76, right hemisphere 27.7
1794 Male, age 80, right hemisphere 26.2
Subiculum
nTPM: 22.3
1977 Female, age 85, both hemispheres 28.4
1901 Male, age 80, both hemispheres 24.0
2042 Male, age 76, both hemispheres 24.0
2438 Female, age 94, left hemisphere 22.0
2729 Female, age 91, right hemisphere 19.0
2619 Male, age 74, both hemispheres 16.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.9
Samples: 197

Max nTPM: 27.7
Min nTPM: 7.1
Std nTPM: 3.8
Median nTPM: 12.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 27.7
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 22.4
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 21.5
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 21.5
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 21.2
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 20.5
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 20.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 20.3
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 20.1
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 19.9
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 19.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 34.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 34.3
FF:10169-103B7 60 years, female 41.5
FF:10153-102I9 76 years, female 27.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 39.0
Pig sample Sample description nTPM
Subiculum
nTPM: 37.2
Samples: 4

Max nTPM: 45.4
Min nTPM: 33.6
Sample A Female 45.4
Sample B Female 33.6
Sample C Male 34.9
Sample D Male 34.7
Dorsal hippocampus
nTPM: 39.0
Samples: 4

Max nTPM: 45.0
Min nTPM: 33.9
Sample A Female 45.0
Sample B Female 41.7
Sample C Male 35.4
Sample D Male 33.9
Entorhinal cortex
nTPM: 37.5
Samples: 4

Max nTPM: 39.2
Min nTPM: 33.5
Sample A Female 39.2
Sample B Female 38.5
Sample C Male 38.9
Sample D Male 33.5
Ventral hippocampus
nTPM: 32.1
Samples: 4

Max nTPM: 39.4
Min nTPM: 28.3
Sample A Female 32.0
Sample B Female 28.8
Sample C Male 28.3
Sample D Male 39.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 21.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 21.9
Samples: 4

Max nTPM: 26.6
Min nTPM: 19.4
Sample A Male 21.9
Sample B Male 19.4
Sample C Female 26.6
Sample D Female 19.6
Hippocampal formation
nTPM: 21.3
Samples: 4

Max nTPM: 22.8
Min nTPM: 19.6
Sample A Male 21.7
Sample B Male 19.6
Sample C Female 22.8
Sample D Female 20.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
70445431 Antisense, RP_050614_03_G06, Mouse strain C57BL/6J (56 days, male) 0.0

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