HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:50.0 nTPM
HPA Brain:164.8 nTPM
GTEx:50.0 nTPM
FANTOM5:80.0 Scaled Tags Per Million
Pig:24.0 nTPM
Mouse:101.4 nTPM
Allen mouse:12.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA058296
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 164.8
Sample id Sample description nTPM
Hippocampus
nTPM: 126.4
2621 Female, age 67, right hemisphere 172.6
2148 Female, age 91, left hemisphere 146.5
1855 Male, age 76, left hemisphere 143.1
1898 Male, age 80, left hemisphere 139.1
1911 Female, age 85, right hemisphere 99.8
2529 Female, age 94, left hemisphere 57.5
Dentate gyrus
nTPM: 136.0
1927 Female, age 91, both hemispheres 188.2
2010 Male, age 76, both hemispheres 155.2
2530 Female, age 94, left hemisphere 140.7
2531 Female, age 67, both hemispheres 133.3
2528 Male, age 74, both hemispheres 102.6
2246 Female, age 85, both hemispheres 96.0
Entorhinal gyrus
nTPM: 52.0
2613 Female, age 94, left hemisphere 74.2
1938 Female, age 85, left hemisphere 54.5
2764 Male, age 80, right hemisphere 50.8
2686 Male, age 75, right hemisphere 46.8
1787 Male, age 76, left hemisphere 46.3
2117 Female, age 91, right hemisphere 39.3
Hippocampus, CA1
nTPM: 164.8
2749 Male, age 80, left hemisphere 308.8
1873 Female, age 85, both hemispheres 158.1
2045 Male, age 76, both hemispheres 155.6
2527 Male, age 74, both hemispheres 136.0
2082 Female, age 91, right hemisphere 65.5
Hippocampus, CA2
nTPM: 102.8
1963 Male, age 80, left hemisphere 195.2
1892 Male, age 76, both hemispheres 152.3
2249 Male, age 74, both hemispheres 104.6
2437 Female, age 94, left hemisphere 76.6
2113 Female, age 91, right hemisphere 50.6
1940 Female, age 85, left hemisphere 37.3
Hippocampus, CA3
nTPM: 131.0
2137 Male, age 80, left hemisphere 205.4
2620 Female, age 94, left hemisphere 157.7
2861 Female, age 67, both hemispheres 149.2
2436 Male, age 74, both hemispheres 105.7
1867 Male, age 76, both hemispheres 99.0
1891 Female, age 85, both hemispheres 68.9
Parahippocampal cortex
nTPM: 54.7
2245 Female, age 91, both hemispheres 80.8
2693 Female, age 94, both hemispheres 72.1
2250 Female, age 67, right hemisphere 63.5
2018 Male, age 76, both hemispheres 59.7
1933 Female, age 85, both hemispheres 51.2
2622 Female, age 67, right hemisphere 49.8
1850 Male, age 80, both hemispheres 48.3
1990 Female, age 91, right hemisphere 44.3
2692 Male, age 74, both hemispheres 40.6
2532 Female, age 72, left hemisphere 37.0
Perirhinal gyrus
nTPM: 63.0
2521 Female, age 94, right hemisphere 86.2
1847 Female, age 91, left hemisphere 85.1
1794 Male, age 80, right hemisphere 49.7
2848 Male, age 76, right hemisphere 49.1
1841 Female, age 85, right hemisphere 44.9
Subiculum
nTPM: 66.6
1901 Male, age 80, both hemispheres 97.0
2729 Female, age 91, right hemisphere 81.9
2042 Male, age 76, both hemispheres 64.8
1977 Female, age 85, both hemispheres 56.9
2438 Female, age 94, left hemisphere 52.7
2619 Male, age 74, both hemispheres 46.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 50.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 50.0
Samples: 197

Max nTPM: 206.2
Min nTPM: 2.4
Std nTPM: 38.7
Median nTPM: 37.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 206.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 185.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 172.3
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 163.6
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 145.4
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 140.8
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 133.1
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 130.6
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 129.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 128.1
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 126.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 80.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 80.0
FF:10169-103B7 60 years, female 116.3
FF:10153-102I9 76 years, female 43.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 24.0
Pig sample Sample description nTPM
Subiculum
nTPM: 16.7
Samples: 4

Max nTPM: 21.9
Min nTPM: 12.2
Sample A Female 21.9
Sample B Female 15.6
Sample C Male 17.1
Sample D Male 12.2
Dorsal hippocampus
nTPM: 24.0
Samples: 4

Max nTPM: 27.6
Min nTPM: 17.4
Sample A Female 27.3
Sample B Female 27.6
Sample C Male 17.4
Sample D Male 23.7
Entorhinal cortex
nTPM: 20.6
Samples: 4

Max nTPM: 24.0
Min nTPM: 18.5
Sample A Female 19.2
Sample B Female 24.0
Sample C Male 20.5
Sample D Male 18.5
Ventral hippocampus
nTPM: 20.6
Samples: 4

Max nTPM: 30.6
Min nTPM: 14.8
Sample A Female 14.8
Sample B Female 15.7
Sample C Male 21.4
Sample D Male 30.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 101.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 86.4
Samples: 4

Max nTPM: 89.8
Min nTPM: 82.5
Sample A Male 88.2
Sample B Male 85.1
Sample C Female 82.5
Sample D Female 89.8
Hippocampal formation
nTPM: 101.4
Samples: 4

Max nTPM: 111.9
Min nTPM: 90.3
Sample A Male 90.3
Sample B Male 106.1
Sample C Female 111.9
Sample D Female 97.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.1
75774678 Antisense, RP_060530_01_D03, Mouse strain C57BL/6J (56 days, male) 13.3
671241 Antisense, RP_040914_02_A08, Mouse strain C57BL/6J (56 days, male) 10.9

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