HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:110.6 nTPM
HPA Brain:128.3 nTPM
GTEx:110.6 nTPM
FANTOM5:57.3 Scaled Tags Per Million
Pig:176.4 nTPM
Mouse:146.8 nTPM
Allen mouse:19.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA000261Antibody HPA009066Antibody HPA047089Antibody HPA053624
Glial cells LowNot detectedLowNot detected
Neuronal cells Not detectedNot detectedMediumHigh








HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 128.3
Sample id Sample description nTPM
Hippocampus
nTPM: 96.5
1898 Male, age 80, left hemisphere 116.2
1855 Male, age 76, left hemisphere 107.7
2621 Female, age 67, right hemisphere 103.5
2529 Female, age 94, left hemisphere 87.3
1911 Female, age 85, right hemisphere 83.4
2148 Female, age 91, left hemisphere 81.2
Dentate gyrus
nTPM: 93.8
2530 Female, age 94, left hemisphere 107.4
2246 Female, age 85, both hemispheres 106.8
2010 Male, age 76, both hemispheres 102.5
2531 Female, age 67, both hemispheres 91.2
1927 Female, age 91, both hemispheres 87.0
2528 Male, age 74, both hemispheres 67.8
Entorhinal gyrus
nTPM: 108.1
1938 Female, age 85, left hemisphere 129.7
2764 Male, age 80, right hemisphere 113.5
2686 Male, age 75, right hemisphere 107.8
1787 Male, age 76, left hemisphere 107.1
2613 Female, age 94, left hemisphere 106.9
2117 Female, age 91, right hemisphere 83.4
Hippocampus, CA1
nTPM: 94.2
2045 Male, age 76, both hemispheres 105.5
2749 Male, age 80, left hemisphere 103.4
1873 Female, age 85, both hemispheres 95.7
2082 Female, age 91, right hemisphere 85.5
2527 Male, age 74, both hemispheres 81.0
Hippocampus, CA2
nTPM: 95.2
1892 Male, age 76, both hemispheres 118.0
1940 Female, age 85, left hemisphere 105.2
1963 Male, age 80, left hemisphere 93.0
2437 Female, age 94, left hemisphere 92.1
2113 Female, age 91, right hemisphere 87.1
2249 Male, age 74, both hemispheres 75.7
Hippocampus, CA3
nTPM: 91.2
1867 Male, age 76, both hemispheres 107.7
2137 Male, age 80, left hemisphere 100.2
2861 Female, age 67, both hemispheres 93.0
1891 Female, age 85, both hemispheres 86.5
2620 Female, age 94, left hemisphere 83.7
2436 Male, age 74, both hemispheres 75.9
Parahippocampal cortex
nTPM: 110.0
1850 Male, age 80, both hemispheres 137.6
2532 Female, age 72, left hemisphere 136.8
2245 Female, age 91, both hemispheres 123.8
1933 Female, age 85, both hemispheres 116.5
2250 Female, age 67, right hemisphere 103.9
2693 Female, age 94, both hemispheres 102.6
1990 Female, age 91, right hemisphere 99.2
2018 Male, age 76, both hemispheres 97.9
2622 Female, age 67, right hemisphere 97.2
2692 Male, age 74, both hemispheres 85.0
Perirhinal gyrus
nTPM: 128.3
1794 Male, age 80, right hemisphere 133.0
1847 Female, age 91, left hemisphere 133.0
2848 Male, age 76, right hemisphere 131.5
1841 Female, age 85, right hemisphere 126.5
2521 Female, age 94, right hemisphere 117.3
Subiculum
nTPM: 91.6
1977 Female, age 85, both hemispheres 112.9
2438 Female, age 94, left hemisphere 100.1
2042 Male, age 76, both hemispheres 95.2
1901 Male, age 80, both hemispheres 92.9
2619 Male, age 74, both hemispheres 75.6
2729 Female, age 91, right hemisphere 72.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 110.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 110.6
Samples: 197

Max nTPM: 312.0
Min nTPM: 49.8
Std nTPM: 38.3
Median nTPM: 101.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 312.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 259.4
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 234.6
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 230.2
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 212.7
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 196.6
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 195.5
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 195.4
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 184.2
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 183.7
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 183.5
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 57.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 57.3
FF:10169-103B7 60 years, female 64.3
FF:10153-102I9 76 years, female 50.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 176.4
Pig sample Sample description nTPM
Subiculum
nTPM: 156.9
Samples: 4

Max nTPM: 196.0
Min nTPM: 139.8
Sample A Female 196.0
Sample B Female 142.3
Sample C Male 139.8
Sample D Male 149.5
Dorsal hippocampus
nTPM: 176.4
Samples: 4

Max nTPM: 221.0
Min nTPM: 144.1
Sample A Female 221.0
Sample B Female 179.9
Sample C Male 160.6
Sample D Male 144.1
Entorhinal cortex
nTPM: 173.8
Samples: 4

Max nTPM: 189.0
Min nTPM: 154.6
Sample A Female 189.0
Sample B Female 182.0
Sample C Male 169.4
Sample D Male 154.6
Ventral hippocampus
nTPM: 154.1
Samples: 4

Max nTPM: 194.4
Min nTPM: 115.8
Sample A Female 149.8
Sample B Female 115.8
Sample C Male 156.5
Sample D Male 194.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 146.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 146.8
Samples: 4

Max nTPM: 152.6
Min nTPM: 137.0
Sample A Male 137.0
Sample B Male 151.2
Sample C Female 146.5
Sample D Female 152.6
Hippocampal formation
nTPM: 141.7
Samples: 4

Max nTPM: 151.6
Min nTPM: 133.5
Sample A Male 151.6
Sample B Male 140.1
Sample C Female 141.5
Sample D Female 133.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 19.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 19.1
275873 Antisense, RP_040604_02_F06, Mouse strain C57BL/6J (56 days, male) 23.1
199223 Antisense, RP_040604_02_F06, Mouse strain C57BL/6J (56 days, male) 21.7
70919358 Antisense, RP_050713_01_B08, Mouse strain C57BL/6J (56 days, male) 15.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org