HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:60.9 nTPM
HPA Brain:44.2 nTPM
GTEx:60.9 nTPM
FANTOM5:68.3 Scaled Tags Per Million
Pig:30.8 nTPM
Mouse:73.3 nTPM
Allen mouse:6.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA055141
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 44.2
Sample id Sample description nTPM
Hippocampus
nTPM: 40.0
1898 Male, age 80, left hemisphere 52.4
1855 Male, age 76, left hemisphere 40.1
2529 Female, age 94, left hemisphere 39.1
2621 Female, age 67, right hemisphere 37.7
2148 Female, age 91, left hemisphere 35.8
1911 Female, age 85, right hemisphere 35.1
Dentate gyrus
nTPM: 38.5
1927 Female, age 91, both hemispheres 42.2
2010 Male, age 76, both hemispheres 42.2
2530 Female, age 94, left hemisphere 42.2
2246 Female, age 85, both hemispheres 38.3
2528 Male, age 74, both hemispheres 33.5
2531 Female, age 67, both hemispheres 32.5
Entorhinal gyrus
nTPM: 37.2
2764 Male, age 80, right hemisphere 44.7
1938 Female, age 85, left hemisphere 43.8
1787 Male, age 76, left hemisphere 38.0
2117 Female, age 91, right hemisphere 37.9
2686 Male, age 75, right hemisphere 29.9
2613 Female, age 94, left hemisphere 28.7
Hippocampus, CA1
nTPM: 43.4
2749 Male, age 80, left hemisphere 58.2
1873 Female, age 85, both hemispheres 42.3
2045 Male, age 76, both hemispheres 42.3
2527 Male, age 74, both hemispheres 41.5
2082 Female, age 91, right hemisphere 32.9
Hippocampus, CA2
nTPM: 40.4
1892 Male, age 76, both hemispheres 51.2
1963 Male, age 80, left hemisphere 44.5
2249 Male, age 74, both hemispheres 44.4
2437 Female, age 94, left hemisphere 37.7
1940 Female, age 85, left hemisphere 34.4
2113 Female, age 91, right hemisphere 30.0
Hippocampus, CA3
nTPM: 41.1
2137 Male, age 80, left hemisphere 44.7
2620 Female, age 94, left hemisphere 43.9
2436 Male, age 74, both hemispheres 43.7
1867 Male, age 76, both hemispheres 43.3
1891 Female, age 85, both hemispheres 38.9
2861 Female, age 67, both hemispheres 32.3
Parahippocampal cortex
nTPM: 35.5
1850 Male, age 80, both hemispheres 45.6
1933 Female, age 85, both hemispheres 41.1
2532 Female, age 72, left hemisphere 39.7
2245 Female, age 91, both hemispheres 37.5
2250 Female, age 67, right hemisphere 37.4
1990 Female, age 91, right hemisphere 35.3
2692 Male, age 74, both hemispheres 34.1
2018 Male, age 76, both hemispheres 32.6
2693 Female, age 94, both hemispheres 26.2
2622 Female, age 67, right hemisphere 25.1
Perirhinal gyrus
nTPM: 44.2
1794 Male, age 80, right hemisphere 51.4
1847 Female, age 91, left hemisphere 50.6
1841 Female, age 85, right hemisphere 44.5
2521 Female, age 94, right hemisphere 38.8
2848 Male, age 76, right hemisphere 35.8
Subiculum
nTPM: 39.2
1901 Male, age 80, both hemispheres 45.0
1977 Female, age 85, both hemispheres 45.0
2438 Female, age 94, left hemisphere 43.0
2619 Male, age 74, both hemispheres 36.7
2729 Female, age 91, right hemisphere 33.4
2042 Male, age 76, both hemispheres 32.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 60.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 60.9
Samples: 197

Max nTPM: 122.9
Min nTPM: 35.6
Std nTPM: 13.3
Median nTPM: 59.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 122.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 121.4
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 99.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 97.6
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 96.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 93.9
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 91.2
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 88.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 87.7
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 86.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 86.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 68.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 68.3
FF:10169-103B7 60 years, female 76.8
FF:10153-102I9 76 years, female 59.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 30.8
Pig sample Sample description nTPM
Subiculum
nTPM: 27.5
Samples: 4

Max nTPM: 32.9
Min nTPM: 25.5
Sample A Female 32.9
Sample B Female 25.5
Sample C Male 25.7
Sample D Male 25.8
Dorsal hippocampus
nTPM: 30.0
Samples: 4

Max nTPM: 39.0
Min nTPM: 22.3
Sample A Female 39.0
Sample B Female 30.9
Sample C Male 27.7
Sample D Male 22.3
Entorhinal cortex
nTPM: 24.4
Samples: 4

Max nTPM: 27.9
Min nTPM: 21.8
Sample A Female 27.9
Sample B Female 24.4
Sample C Male 23.4
Sample D Male 21.8
Ventral hippocampus
nTPM: 30.8
Samples: 4

Max nTPM: 37.6
Min nTPM: 22.5
Sample A Female 32.9
Sample B Female 22.5
Sample C Male 37.6
Sample D Male 30.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 73.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 71.0
Samples: 4

Max nTPM: 75.9
Min nTPM: 66.5
Sample A Male 66.5
Sample B Male 73.7
Sample C Female 75.9
Sample D Female 67.7
Hippocampal formation
nTPM: 73.3
Samples: 4

Max nTPM: 82.0
Min nTPM: 65.7
Sample A Male 82.0
Sample B Male 65.7
Sample C Female 73.6
Sample D Female 72.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.5
2303 Antisense, RP_040407_02_G07, Mouse strain C57BL/6J (56 days, male) 6.5
2304 Antisense, RP_040407_02_G07, Mouse strain C57BL/6J (56 days, male) 1.6

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