HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:48.7 nTPM
HPA Brain:45.7 nTPM
GTEx:48.7 nTPM
FANTOM5:62.1 Scaled Tags Per Million
Pig:80.1 nTPM
Mouse:80.2 nTPM
Allen mouse:16.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007484
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 45.7
Sample id Sample description nTPM
Hippocampus
nTPM: 41.3
1898 Male, age 80, left hemisphere 50.8
2621 Female, age 67, right hemisphere 42.5
1855 Male, age 76, left hemisphere 42.1
2529 Female, age 94, left hemisphere 40.3
1911 Female, age 85, right hemisphere 37.5
2148 Female, age 91, left hemisphere 34.7
Dentate gyrus
nTPM: 40.5
2010 Male, age 76, both hemispheres 49.1
1927 Female, age 91, both hemispheres 42.4
2530 Female, age 94, left hemisphere 39.9
2528 Male, age 74, both hemispheres 39.3
2246 Female, age 85, both hemispheres 38.9
2531 Female, age 67, both hemispheres 33.2
Entorhinal gyrus
nTPM: 39.5
2764 Male, age 80, right hemisphere 44.1
1938 Female, age 85, left hemisphere 44.0
1787 Male, age 76, left hemisphere 41.3
2117 Female, age 91, right hemisphere 40.8
2613 Female, age 94, left hemisphere 34.3
2686 Male, age 75, right hemisphere 32.9
Hippocampus, CA1
nTPM: 43.0
2749 Male, age 80, left hemisphere 50.6
1873 Female, age 85, both hemispheres 45.2
2527 Male, age 74, both hemispheres 41.2
2045 Male, age 76, both hemispheres 40.9
2082 Female, age 91, right hemisphere 36.8
Hippocampus, CA2
nTPM: 42.2
2249 Male, age 74, both hemispheres 48.8
1892 Male, age 76, both hemispheres 45.3
1963 Male, age 80, left hemisphere 43.4
1940 Female, age 85, left hemisphere 40.4
2113 Female, age 91, right hemisphere 38.1
2437 Female, age 94, left hemisphere 37.5
Hippocampus, CA3
nTPM: 41.2
2436 Male, age 74, both hemispheres 49.1
1867 Male, age 76, both hemispheres 47.2
2137 Male, age 80, left hemisphere 42.3
1891 Female, age 85, both hemispheres 42.0
2620 Female, age 94, left hemisphere 37.5
2861 Female, age 67, both hemispheres 29.0
Parahippocampal cortex
nTPM: 40.3
1850 Male, age 80, both hemispheres 52.1
2018 Male, age 76, both hemispheres 44.9
1933 Female, age 85, both hemispheres 44.7
2250 Female, age 67, right hemisphere 43.4
1990 Female, age 91, right hemisphere 39.0
2693 Female, age 94, both hemispheres 39.0
2245 Female, age 91, both hemispheres 38.8
2532 Female, age 72, left hemisphere 38.1
2692 Male, age 74, both hemispheres 32.6
2622 Female, age 67, right hemisphere 30.8
Perirhinal gyrus
nTPM: 45.7
1847 Female, age 91, left hemisphere 50.8
1841 Female, age 85, right hemisphere 49.5
1794 Male, age 80, right hemisphere 46.6
2521 Female, age 94, right hemisphere 42.3
2848 Male, age 76, right hemisphere 39.3
Subiculum
nTPM: 42.6
1901 Male, age 80, both hemispheres 46.1
1977 Female, age 85, both hemispheres 44.8
2042 Male, age 76, both hemispheres 43.6
2438 Female, age 94, left hemisphere 41.1
2729 Female, age 91, right hemisphere 40.7
2619 Male, age 74, both hemispheres 39.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 48.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 48.7
Samples: 197

Max nTPM: 127.0
Min nTPM: 30.7
Std nTPM: 9.4
Median nTPM: 47.7
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 127.0
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 82.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 79.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 67.9
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 64.8
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 64.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 64.0
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 64.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 63.3
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 62.6
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 62.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 62.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 62.1
FF:10169-103B7 60 years, female 65.4
FF:10153-102I9 76 years, female 58.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 80.1
Pig sample Sample description nTPM
Subiculum
nTPM: 64.8
Samples: 4

Max nTPM: 85.2
Min nTPM: 55.6
Sample A Female 85.2
Sample B Female 59.9
Sample C Male 55.6
Sample D Male 58.5
Dorsal hippocampus
nTPM: 80.1
Samples: 4

Max nTPM: 105.5
Min nTPM: 63.4
Sample A Female 105.5
Sample B Female 77.6
Sample C Male 73.9
Sample D Male 63.4
Entorhinal cortex
nTPM: 61.4
Samples: 4

Max nTPM: 70.1
Min nTPM: 47.1
Sample A Female 70.1
Sample B Female 68.5
Sample C Male 59.8
Sample D Male 47.1
Ventral hippocampus
nTPM: 73.5
Samples: 4

Max nTPM: 82.0
Min nTPM: 56.4
Sample A Female 82.0
Sample B Female 56.4
Sample C Male 81.8
Sample D Male 73.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 80.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 75.9
Samples: 4

Max nTPM: 79.0
Min nTPM: 72.3
Sample A Male 74.3
Sample B Male 78.0
Sample C Female 79.0
Sample D Female 72.3
Hippocampal formation
nTPM: 80.2
Samples: 4

Max nTPM: 94.5
Min nTPM: 74.7
Sample A Male 94.5
Sample B Male 74.7
Sample C Female 76.4
Sample D Female 75.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 16.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 16.0
67815541 Antisense, RP_040920_01_G11, Mouse strain C57BL/6J (56 days, male) 16.0

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