HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:11.6 nTPM
HPA Brain:10.5 nTPM
GTEx:11.6 nTPM
FANTOM5:11.8 Scaled Tags Per Million
Pig:21.8 nTPM
Mouse:15.0 nTPM
Allen mouse:1.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA046175
Glial cells Medium
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 10.5
Sample id Sample description nTPM
Hippocampus
nTPM: 8.8
2529 Female, age 94, left hemisphere 10.9
2621 Female, age 67, right hemisphere 9.8
2148 Female, age 91, left hemisphere 9.4
1898 Male, age 80, left hemisphere 8.5
1855 Male, age 76, left hemisphere 7.8
1911 Female, age 85, right hemisphere 6.2
Dentate gyrus
nTPM: 8.9
2530 Female, age 94, left hemisphere 13.3
2531 Female, age 67, both hemispheres 11.2
2246 Female, age 85, both hemispheres 8.2
2528 Male, age 74, both hemispheres 7.9
2010 Male, age 76, both hemispheres 7.4
1927 Female, age 91, both hemispheres 5.1
Entorhinal gyrus
nTPM: 10.5
1787 Male, age 76, left hemisphere 12.6
1938 Female, age 85, left hemisphere 11.0
2686 Male, age 75, right hemisphere 10.4
2117 Female, age 91, right hemisphere 9.7
2764 Male, age 80, right hemisphere 9.7
2613 Female, age 94, left hemisphere 9.6
Hippocampus, CA1
nTPM: 6.9
2527 Male, age 74, both hemispheres 8.5
2749 Male, age 80, left hemisphere 7.5
1873 Female, age 85, both hemispheres 6.6
2082 Female, age 91, right hemisphere 6.0
2045 Male, age 76, both hemispheres 5.9
Hippocampus, CA2
nTPM: 7.0
1940 Female, age 85, left hemisphere 9.5
2437 Female, age 94, left hemisphere 9.5
1963 Male, age 80, left hemisphere 7.0
2113 Female, age 91, right hemisphere 6.1
2249 Male, age 74, both hemispheres 5.4
1892 Male, age 76, both hemispheres 4.5
Hippocampus, CA3
nTPM: 7.8
2861 Female, age 67, both hemispheres 10.7
1891 Female, age 85, both hemispheres 8.5
2620 Female, age 94, left hemisphere 8.0
1867 Male, age 76, both hemispheres 7.9
2137 Male, age 80, left hemisphere 6.2
2436 Male, age 74, both hemispheres 5.3
Parahippocampal cortex
nTPM: 8.5
2622 Female, age 67, right hemisphere 11.6
2245 Female, age 91, both hemispheres 11.1
2018 Male, age 76, both hemispheres 9.2
2532 Female, age 72, left hemisphere 9.2
2692 Male, age 74, both hemispheres 9.1
2250 Female, age 67, right hemisphere 8.0
1933 Female, age 85, both hemispheres 7.1
1990 Female, age 91, right hemisphere 7.1
1850 Male, age 80, both hemispheres 6.7
2693 Female, age 94, both hemispheres 6.3
Perirhinal gyrus
nTPM: 7.0
1794 Male, age 80, right hemisphere 8.1
2848 Male, age 76, right hemisphere 7.6
1841 Female, age 85, right hemisphere 7.2
1847 Female, age 91, left hemisphere 6.4
2521 Female, age 94, right hemisphere 5.7
Subiculum
nTPM: 8.3
1977 Female, age 85, both hemispheres 9.5
2042 Male, age 76, both hemispheres 8.8
1901 Male, age 80, both hemispheres 8.6
2438 Female, age 94, left hemisphere 7.9
2619 Male, age 74, both hemispheres 7.8
2729 Female, age 91, right hemisphere 7.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.6
Samples: 197

Max nTPM: 24.9
Min nTPM: 3.9
Std nTPM: 2.9
Median nTPM: 11.4
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 24.9
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 21.2
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 20.4
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 20.3
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 18.8
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 17.3
GTEX-ZVZQ-0011-R1a-SM-57WBU 60-69 years, female 17.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 17.2
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 16.8
GTEX-S7SE-0011-R1A-SM-2XCDE 50-59 years, male 16.1
GTEX-1E1VI-0011-R1a-SM-ARZMM 50-59 years, male 16.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 11.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 11.8
FF:10153-102I9 76 years, female 18.5
FF:10169-103B7 60 years, female 5.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 21.8
Pig sample Sample description nTPM
Subiculum
nTPM: 19.0
Samples: 4

Max nTPM: 25.8
Min nTPM: 15.7
Sample A Female 25.8
Sample B Female 17.0
Sample C Male 15.7
Sample D Male 17.3
Dorsal hippocampus
nTPM: 18.7
Samples: 4

Max nTPM: 20.2
Min nTPM: 17.3
Sample A Female 20.2
Sample B Female 17.4
Sample C Male 20.0
Sample D Male 17.3
Entorhinal cortex
nTPM: 21.8
Samples: 4

Max nTPM: 28.6
Min nTPM: 17.2
Sample A Female 21.0
Sample B Female 20.4
Sample C Male 17.2
Sample D Male 28.6
Ventral hippocampus
nTPM: 19.4
Samples: 4

Max nTPM: 24.0
Min nTPM: 14.4
Sample A Female 16.5
Sample B Female 14.4
Sample C Male 22.6
Sample D Male 24.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 15.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.7
Samples: 4

Max nTPM: 14.2
Min nTPM: 11.9
Sample A Male 11.9
Sample B Male 12.5
Sample C Female 12.3
Sample D Female 14.2
Hippocampal formation
nTPM: 15.0
Samples: 4

Max nTPM: 15.6
Min nTPM: 14.0
Sample A Male 15.0
Sample B Male 15.6
Sample C Female 15.5
Sample D Female 14.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.3
631710 Antisense, RP_040907_01_A11, Mouse strain C57BL/6J (56 days, male) 1.3

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