HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:91.2 nTPM
HPA Brain:105.4 nTPM
GTEx:91.2 nTPM
FANTOM5:116.2 Scaled Tags Per Million
Pig:158.1 nTPM
Mouse:204.3 nTPM
Allen mouse:15.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038759Antibody HPA040515Antibody HPA045924
Glial cells LowLowLow
Neuronal cells Not detectedLowMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 105.4
Sample id Sample description nTPM
Hippocampus
nTPM: 95.5
1898 Male, age 80, left hemisphere 109.3
2621 Female, age 67, right hemisphere 103.1
1855 Male, age 76, left hemisphere 98.0
1911 Female, age 85, right hemisphere 90.8
2529 Female, age 94, left hemisphere 86.0
2148 Female, age 91, left hemisphere 85.8
Dentate gyrus
nTPM: 91.8
2530 Female, age 94, left hemisphere 119.7
2010 Male, age 76, both hemispheres 102.5
2246 Female, age 85, both hemispheres 86.3
2528 Male, age 74, both hemispheres 83.9
1927 Female, age 91, both hemispheres 81.8
2531 Female, age 67, both hemispheres 76.5
Entorhinal gyrus
nTPM: 105.4
2613 Female, age 94, left hemisphere 118.9
2117 Female, age 91, right hemisphere 117.4
2764 Male, age 80, right hemisphere 113.6
1938 Female, age 85, left hemisphere 105.2
1787 Male, age 76, left hemisphere 93.2
2686 Male, age 75, right hemisphere 84.4
Hippocampus, CA1
nTPM: 89.9
2749 Male, age 80, left hemisphere 120.8
1873 Female, age 85, both hemispheres 97.0
2527 Male, age 74, both hemispheres 81.2
2045 Male, age 76, both hemispheres 79.6
2082 Female, age 91, right hemisphere 70.7
Hippocampus, CA2
nTPM: 90.3
1892 Male, age 76, both hemispheres 107.0
1963 Male, age 80, left hemisphere 101.9
2437 Female, age 94, left hemisphere 92.7
2249 Male, age 74, both hemispheres 85.4
1940 Female, age 85, left hemisphere 79.4
2113 Female, age 91, right hemisphere 75.3
Hippocampus, CA3
nTPM: 89.9
1867 Male, age 76, both hemispheres 102.1
2137 Male, age 80, left hemisphere 95.9
2620 Female, age 94, left hemisphere 95.7
1891 Female, age 85, both hemispheres 93.7
2861 Female, age 67, both hemispheres 84.4
2436 Male, age 74, both hemispheres 67.6
Parahippocampal cortex
nTPM: 91.5
2532 Female, age 72, left hemisphere 99.9
2692 Male, age 74, both hemispheres 99.5
1933 Female, age 85, both hemispheres 96.6
1850 Male, age 80, both hemispheres 95.3
2245 Female, age 91, both hemispheres 95.2
1990 Female, age 91, right hemisphere 93.7
2693 Female, age 94, both hemispheres 88.9
2018 Male, age 76, both hemispheres 87.4
2250 Female, age 67, right hemisphere 82.2
2622 Female, age 67, right hemisphere 76.1
Perirhinal gyrus
nTPM: 89.9
1847 Female, age 91, left hemisphere 93.8
2521 Female, age 94, right hemisphere 92.1
2848 Male, age 76, right hemisphere 89.3
1794 Male, age 80, right hemisphere 87.4
1841 Female, age 85, right hemisphere 86.9
Subiculum
nTPM: 100.4
2042 Male, age 76, both hemispheres 115.6
1901 Male, age 80, both hemispheres 115.0
1977 Female, age 85, both hemispheres 102.1
2438 Female, age 94, left hemisphere 99.5
2619 Male, age 74, both hemispheres 99.3
2729 Female, age 91, right hemisphere 70.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 91.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 91.2
Samples: 197

Max nTPM: 172.1
Min nTPM: 47.6
Std nTPM: 21.6
Median nTPM: 88.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 172.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 158.5
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 151.3
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 145.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 137.8
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 136.3
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 131.6
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 127.0
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 126.9
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 125.4
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 125.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 116.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 116.2
FF:10153-102I9 76 years, female 122.4
FF:10169-103B7 60 years, female 110.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 158.1
Pig sample Sample description nTPM
Subiculum
nTPM: 141.6
Samples: 4

Max nTPM: 179.7
Min nTPM: 121.9
Sample A Female 179.7
Sample B Female 126.8
Sample C Male 138.0
Sample D Male 121.9
Dorsal hippocampus
nTPM: 158.1
Samples: 4

Max nTPM: 203.4
Min nTPM: 107.1
Sample A Female 203.4
Sample B Female 156.1
Sample C Male 165.9
Sample D Male 107.1
Entorhinal cortex
nTPM: 132.9
Samples: 4

Max nTPM: 145.6
Min nTPM: 119.2
Sample A Female 143.4
Sample B Female 119.2
Sample C Male 145.6
Sample D Male 123.2
Ventral hippocampus
nTPM: 145.6
Samples: 4

Max nTPM: 177.0
Min nTPM: 99.7
Sample A Female 157.4
Sample B Female 99.7
Sample C Male 177.0
Sample D Male 148.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 204.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 204.3
Samples: 4

Max nTPM: 218.1
Min nTPM: 198.7
Sample A Male 198.7
Sample B Male 201.2
Sample C Female 199.3
Sample D Female 218.1
Hippocampal formation
nTPM: 200.5
Samples: 4

Max nTPM: 208.1
Min nTPM: 196.4
Sample A Male 199.0
Sample B Male 198.6
Sample C Female 208.1
Sample D Female 196.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 15.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.2
71495807 Antisense, RP_050913_03_F04, Mouse strain C57BL/6J (56 days, male) 15.2

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