We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
513.2
nTPM
FANTOM5:
501.1
Scaled Tags Per Million
Pig:
184.6
nTPM
Allen mouse:
9.4
Expression energy
PONS - Annotated protein expression
Pending normal tissue analysis
PONS - HPA Brain RNA-seq
Max nTPM
513.2
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 463.2
2301
Female, age 85, both hemispheres
573.1
2090
Male, age 80, both hemispheres
444.7
1984
Male, age 76, both hemispheres
418.2
2188
Female, age 91, both hemispheres
417.0
Dorsal cochlear nucleus nTPM: 462.4
2802
Male, age 74, right hemisphere
530.7
2187
Female, age 91, both hemispheres
476.6
2058
Male, age 76, both hemispheres
466.4
2378
Male, age 80, both hemispheres
445.0
2370
Male, age 61, both hemispheres
393.5
Dorsal tegmental nucleus nTPM: 476.5
1936
Male, age 76, left hemisphere
486.3
2083
Male, age 80, both hemispheres
483.3
2326
Male, age 74, both hemispheres
478.0
2358
Male, age 61, both hemispheres
458.4
Dorsolateral tegmental area nTPM: 456.4
2751
Female, age 85, both hemispheres
527.4
2654
Male, age 80, both hemispheres
477.2
2337
Male, age 61, both hemispheres
451.8
2360
Male, age 74, both hemispheres
444.5
2141
Male, age 76, both hemispheres
381.0
Kolliker-Fuse nucleus nTPM: 513.2
2315
Male, age 76, right hemisphere
736.6
2163
Male, age 80, both hemispheres
415.9
2793
Female, age 91, left hemisphere
387.0
Lateral lemniscal nuclei nTPM: 341.3
2320
Female, age 91, left hemisphere
382.2
2746
Female, age 85, left hemisphere
371.5
2453
Male, age 74, right hemisphere
328.0
2169
Male, age 76, both hemispheres
319.8
2036
Male, age 80, both hemispheres
305.1
Lateral parabrachial nucleus nTPM: 441.9
2792
Male, age 76, both hemispheres
569.7
2790
Male, age 61, both hemispheres
408.6
2139
Female, age 85, right hemisphere
406.3
2013
Male, age 80, both hemispheres
382.8
Lateral vestibular nucleus nTPM: 474.7
2311
Male, age 80, both hemispheres
506.7
2184
Male, age 76, both hemispheres
442.8
Locus coeruleus nTPM: 382.9
2123
Female, age 91, both hemispheres
446.2
2317
Female, age 72, unknown
443.4
1980
Male, age 76, both hemispheres
420.9
2162
Male, age 80, both hemispheres
388.4
2014
Male, age 55, unknown
368.6
2720
Male, age 74, both hemispheres
325.7
2788
Male, age 74, unknown
287.2
Medial parabrachial nucleus nTPM: 470.9
2170
Female, age 91, both hemispheres
536.1
2463
Female, age 85, right hemisphere
520.3
2156
Male, age 61, both hemispheres
514.6
2786
Male, age 76, both hemispheres
427.1
2854
Male, age 80, both hemispheres
356.7
Medial periolivary nuclei nTPM: 351.5
2791
Male, age 74, right hemisphere
382.0
2081
Male, age 80, both hemispheres
370.7
2063
Male, age 76, both hemispheres
356.8
2458
Female, age 91, both hemispheres
356.0
2171
Female, age 85, both hemispheres
291.8
Motor facial nucleus nTPM: 363.1
2795
Female, age 91, both hemispheres
427.7
2126
Male, age 61, both hemispheres
386.7
2062
Male, age 76, both hemispheres
365.6
2365
Male, age 74, right hemisphere
359.8
2697
Female, age 85, both hemispheres
340.3
2327
Male, age 80, both hemispheres
298.3
Motor trigeminal nucleus nTPM: 386.6
2309
Male, age 76, both hemispheres
421.1
2321
Female, age 91, both hemispheres
403.3
2335
Male, age 61, both hemispheres
397.1
2560
Male, age 74, both hemispheres
389.4
2079
Male, age 80, both hemispheres
322.2
Nuclei of the trapezoid body nTPM: 345.0
2368
Female, age 91, both hemispheres
385.4
2166
Male, age 80, both hemispheres
384.3
1983
Male, age 76, both hemispheres
379.7
2735
Female, age 85, both hemispheres
298.7
2159
Male, age 61, both hemispheres
277.0
Nucleus raphe magnus nTPM: 310.0
2455
Male, age 74, both hemispheres
402.2
2328
Male, age 80, both hemispheres
379.7
2051
Male, age 76, both hemispheres
336.5
2459
Female, age 91, both hemispheres
302.6
2172
Female, age 85, both hemispheres
226.0
2160
Male, age 61, both hemispheres
213.3
Paramedian reticular nucleus nTPM: 389.1
2057
Male, age 80, both hemispheres
488.9
2052
Male, age 76, both hemispheres
398.5
2313
Male, age 61, both hemispheres
341.0
2050
Female, age 85, both hemispheres
328.1
Pedunculopontine tegmental nucleus nTPM: 433.0
2334
Male, age 80, both hemispheres
481.2
1921
Female, age 85, both hemispheres
440.0
2338
Male, age 61, both hemispheres
377.8
Pontine nuclei nTPM: 356.2
2319
Female, age 91, both hemispheres
417.9
1863
Male, age 55, unknown
412.0
2454
Male, age 74, left hemisphere
410.9
2109
Female, age 72, unknown
385.8
2115
Male, age 80, left hemisphere
350.8
1968
Male, age 76, left hemisphere
340.0
2787
Female, age 85, both hemispheres
311.3
2727
Male, age 61, right hemisphere
220.6
Pontine raphe nucleus nTPM: 345.9
2853
Male, age 76, midline
372.3
2122
Female, age 85, midline
319.5
Posteroventral cochlear nucleus nTPM: 434.5
2070
Male, age 76, both hemispheres
516.5
2135
Female, age 91, both hemispheres
428.1
2371
Male, age 61, both hemispheres
415.5
2752
Female, age 85, both hemispheres
411.7
2341
Male, age 80, both hemispheres
400.5
Principal sensory trigeminal nucleus nTPM: 345.3
2324
Male, age 76, both hemispheres
485.6
2367
Female, age 91, left hemisphere
353.8
2008
Male, age 80, left hemisphere
293.0
2158
Male, age 61, both hemispheres
248.6
Reticular pontine nucleus, caudal nTPM: 387.7
2092
Male, age 76, both hemispheres
429.7
2559
Male, age 74, both hemispheres
421.7
2457
Female, age 91, both hemispheres
381.8
2332
Male, age 80, right hemisphere
317.4
Reticular pontine nucleus, oral nTPM: 401.9
1939
Male, age 80, both hemispheres
431.4
2366
Female, age 91, both hemispheres
421.6
2167
Male, age 76, both hemispheres
400.3
2012
Female, age 85, both hemispheres
396.8
2361
Male, age 74, both hemispheres
359.4
Reticulotegmental nucleus nTPM: 413.5
2322
Female, age 91, both hemispheres
448.4
2333
Male, age 80, both hemispheres
436.1
2452
Male, age 74, both hemispheres
428.3
2325
Male, age 76, both hemispheres
341.3
Spinal trigeminal nucleus, oral nTPM: 411.8
1978
Male, age 76, both hemispheres
434.6
2164
Male, age 80, both hemispheres
409.9
2737
Female, age 85, both hemispheres
391.0
Subcoeruleus area nTPM: 433.8
2369
Female, age 85, left hemisphere
515.5
2451
Male, age 74, both hemispheres
469.6
2323
Female, age 91, left hemisphere
469.0
1958
Male, age 80, both hemispheres
374.9
2089
Male, age 76, left hemisphere
339.8
Superior olive nTPM: 363.1
2364
Male, age 74, right hemisphere
417.0
2020
Male, age 76, both hemispheres
390.9
2329
Male, age 80, right hemisphere
384.2
2561
Female, age 91, both hemispheres
320.1
1875
Female, age 85, both hemispheres
303.2
Ventral periolivary nuclei nTPM: 318.2
2023
Male, age 76, both hemispheres
361.4
2165
Male, age 80, both hemispheres
359.8
2130
Female, age 85, both hemispheres
307.9
2794
Female, age 91, left hemisphere
243.8
Ventrolateral tegmental area, A5 NE cell group nTPM: 394.0
2359
Male, age 61, both hemispheres
469.8
2456
Female, age 91, both hemispheres
405.5
2161
Male, age 80, both hemispheres
384.9
1959
Male, age 76, both hemispheres
372.1
2840
Female, age 85, both hemispheres
371.3
2449
Male, age 74, both hemispheres
360.4
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
184.6
Pig sample
Sample description
nTPM
Pons nTPM: 184.6
Samples: 4
Max nTPM: 321.7
Min nTPM: 110.7
Sample A
Female
321.7
Sample B
Female
110.7
Sample C
Male
137.2
Sample D
Male
168.7
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
