HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:23.4 nTPM
HPA Brain:130.6 nTPM
GTEx:23.4 nTPM
FANTOM5:195.8 Scaled Tags Per Million
Pig:59.9 nTPM
Mouse:160.5 nTPM
Allen mouse:11.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA010639Antibody HPA013434
Glial cells Not detectedLow
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 130.6
Sample id Sample description nTPM
Hippocampus
nTPM: 109.6
1898 Male, age 80, left hemisphere 126.8
1855 Male, age 76, left hemisphere 121.9
1911 Female, age 85, right hemisphere 111.3
2529 Female, age 94, left hemisphere 106.8
2148 Female, age 91, left hemisphere 101.4
2621 Female, age 67, right hemisphere 89.7
Dentate gyrus
nTPM: 89.4
1927 Female, age 91, both hemispheres 112.5
2010 Male, age 76, both hemispheres 109.1
2246 Female, age 85, both hemispheres 104.5
2528 Male, age 74, both hemispheres 80.7
2530 Female, age 94, left hemisphere 69.5
2531 Female, age 67, both hemispheres 59.8
Entorhinal gyrus
nTPM: 109.3
1938 Female, age 85, left hemisphere 176.3
2117 Female, age 91, right hemisphere 118.2
1787 Male, age 76, left hemisphere 103.4
2613 Female, age 94, left hemisphere 96.4
2764 Male, age 80, right hemisphere 91.4
2686 Male, age 75, right hemisphere 69.9
Hippocampus, CA1
nTPM: 120.4
2749 Male, age 80, left hemisphere 177.7
2045 Male, age 76, both hemispheres 116.2
1873 Female, age 85, both hemispheres 115.0
2527 Male, age 74, both hemispheres 112.5
2082 Female, age 91, right hemisphere 80.6
Hippocampus, CA2
nTPM: 97.9
1892 Male, age 76, both hemispheres 121.4
1940 Female, age 85, left hemisphere 104.4
1963 Male, age 80, left hemisphere 101.3
2249 Male, age 74, both hemispheres 92.8
2113 Female, age 91, right hemisphere 91.0
2437 Female, age 94, left hemisphere 76.6
Hippocampus, CA3
nTPM: 107.3
2137 Male, age 80, left hemisphere 161.2
1867 Male, age 76, both hemispheres 124.6
1891 Female, age 85, both hemispheres 108.7
2436 Male, age 74, both hemispheres 99.4
2620 Female, age 94, left hemisphere 81.8
2861 Female, age 67, both hemispheres 67.9
Parahippocampal cortex
nTPM: 114.4
1850 Male, age 80, both hemispheres 141.8
1933 Female, age 85, both hemispheres 141.6
2250 Female, age 67, right hemisphere 130.0
2622 Female, age 67, right hemisphere 122.8
1990 Female, age 91, right hemisphere 107.6
2692 Male, age 74, both hemispheres 106.7
2245 Female, age 91, both hemispheres 106.4
2693 Female, age 94, both hemispheres 105.2
2018 Male, age 76, both hemispheres 94.6
2532 Female, age 72, left hemisphere 87.2
Perirhinal gyrus
nTPM: 130.6
1841 Female, age 85, right hemisphere 148.4
1847 Female, age 91, left hemisphere 143.8
1794 Male, age 80, right hemisphere 139.0
2521 Female, age 94, right hemisphere 120.6
2848 Male, age 76, right hemisphere 101.2
Subiculum
nTPM: 102.1
1977 Female, age 85, both hemispheres 113.8
1901 Male, age 80, both hemispheres 113.3
2729 Female, age 91, right hemisphere 104.0
2619 Male, age 74, both hemispheres 100.5
2438 Female, age 94, left hemisphere 93.4
2042 Male, age 76, both hemispheres 87.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 23.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 23.4
Samples: 197

Max nTPM: 60.4
Min nTPM: 5.5
Std nTPM: 9.3
Median nTPM: 22.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 60.4
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 51.7
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 49.6
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 48.0
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 43.3
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 42.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 42.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 42.3
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 41.4
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 40.5
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 40.2
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 195.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 195.8
FF:10169-103B7 60 years, female 199.4
FF:10153-102I9 76 years, female 192.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 59.9
Pig sample Sample description nTPM
Subiculum
nTPM: 59.9
Samples: 4

Max nTPM: 65.2
Min nTPM: 54.6
Sample A Female 65.2
Sample B Female 54.6
Sample C Male 56.7
Sample D Male 62.9
Dorsal hippocampus
nTPM: 58.5
Samples: 4

Max nTPM: 62.4
Min nTPM: 53.1
Sample A Female 59.1
Sample B Female 62.4
Sample C Male 59.3
Sample D Male 53.1
Entorhinal cortex
nTPM: 57.0
Samples: 4

Max nTPM: 61.1
Min nTPM: 51.8
Sample A Female 54.5
Sample B Female 60.6
Sample C Male 61.1
Sample D Male 51.8
Ventral hippocampus
nTPM: 51.3
Samples: 4

Max nTPM: 62.8
Min nTPM: 43.8
Sample A Female 46.0
Sample B Female 52.6
Sample C Male 43.8
Sample D Male 62.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 160.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 160.5
Samples: 4

Max nTPM: 176.5
Min nTPM: 152.8
Sample A Male 156.3
Sample B Male 156.4
Sample C Female 152.8
Sample D Female 176.5
Hippocampal formation
nTPM: 155.4
Samples: 4

Max nTPM: 162.6
Min nTPM: 136.6
Sample A Male 162.5
Sample B Male 159.7
Sample C Female 162.6
Sample D Female 136.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.3
71161048 Antisense, RP_050810_02_E11, Mouse strain C57BL/6J (56 days, male) 11.4
69608953 Antisense, RP_050426_04_E10, Mouse strain C57BL/6J (56 days, male) 11.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org