HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:26.8 nTPM
HPA Brain:308.7 nTPM
GTEx:26.8 nTPM
FANTOM5:41.7 Scaled Tags Per Million
Pig:54.9 nTPM
Mouse:70.5 nTPM
Allen mouse:4.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA034873Antibody HPA034874Antibody HPA065335
Glial cells Not detectedLowLow
Neuronal cells HighMediumNot detected






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 308.7
Sample id Sample description nTPM
Hippocampus
nTPM: 209.2
1911 Female, age 85, right hemisphere 298.4
2529 Female, age 94, left hemisphere 246.5
2621 Female, age 67, right hemisphere 219.8
2148 Female, age 91, left hemisphere 172.0
1855 Male, age 76, left hemisphere 168.5
1898 Male, age 80, left hemisphere 150.3
Dentate gyrus
nTPM: 214.3
2530 Female, age 94, left hemisphere 274.6
2246 Female, age 85, both hemispheres 228.8
2528 Male, age 74, both hemispheres 221.7
2010 Male, age 76, both hemispheres 207.9
2531 Female, age 67, both hemispheres 188.1
1927 Female, age 91, both hemispheres 164.8
Entorhinal gyrus
nTPM: 200.5
2117 Female, age 91, right hemisphere 256.8
1787 Male, age 76, left hemisphere 219.1
2764 Male, age 80, right hemisphere 210.9
2613 Female, age 94, left hemisphere 200.9
2686 Male, age 75, right hemisphere 168.8
1938 Female, age 85, left hemisphere 146.7
Hippocampus, CA1
nTPM: 188.7
2082 Female, age 91, right hemisphere 249.4
1873 Female, age 85, both hemispheres 230.6
2527 Male, age 74, both hemispheres 193.9
2045 Male, age 76, both hemispheres 148.8
2749 Male, age 80, left hemisphere 120.7
Hippocampus, CA2
nTPM: 223.2
2437 Female, age 94, left hemisphere 261.0
1963 Male, age 80, left hemisphere 249.3
1940 Female, age 85, left hemisphere 248.6
2113 Female, age 91, right hemisphere 235.9
2249 Male, age 74, both hemispheres 215.8
1892 Male, age 76, both hemispheres 128.6
Hippocampus, CA3
nTPM: 183.2
1891 Female, age 85, both hemispheres 354.5
2137 Male, age 80, left hemisphere 182.0
2436 Male, age 74, both hemispheres 166.3
1867 Male, age 76, both hemispheres 156.9
2620 Female, age 94, left hemisphere 147.5
2861 Female, age 67, both hemispheres 92.0
Parahippocampal cortex
nTPM: 192.1
2532 Female, age 72, left hemisphere 267.0
2692 Male, age 74, both hemispheres 262.1
2693 Female, age 94, both hemispheres 216.9
1933 Female, age 85, both hemispheres 214.4
1990 Female, age 91, right hemisphere 196.7
2018 Male, age 76, both hemispheres 191.1
2245 Female, age 91, both hemispheres 165.6
2250 Female, age 67, right hemisphere 153.0
1850 Male, age 80, both hemispheres 150.7
2622 Female, age 67, right hemisphere 103.4
Perirhinal gyrus
nTPM: 144.2
2521 Female, age 94, right hemisphere 162.7
1841 Female, age 85, right hemisphere 151.0
1847 Female, age 91, left hemisphere 138.2
2848 Male, age 76, right hemisphere 136.3
1794 Male, age 80, right hemisphere 133.0
Subiculum
nTPM: 308.7
2042 Male, age 76, both hemispheres 475.4
1901 Male, age 80, both hemispheres 310.2
2438 Female, age 94, left hemisphere 276.6
1977 Female, age 85, both hemispheres 275.8
2729 Female, age 91, right hemisphere 258.7
2619 Male, age 74, both hemispheres 255.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 26.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 26.8
Samples: 197

Max nTPM: 47.7
Min nTPM: 18.2
Std nTPM: 4.4
Median nTPM: 26.3
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 47.7
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 41.7
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 41.5
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 39.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 37.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 36.6
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 36.4
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 36.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 35.8
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 35.8
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 35.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 41.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 41.7
FF:10153-102I9 76 years, female 45.1
FF:10169-103B7 60 years, female 38.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 54.9
Pig sample Sample description nTPM
Subiculum
nTPM: 45.8
Samples: 4

Max nTPM: 56.0
Min nTPM: 42.0
Sample A Female 56.0
Sample B Female 42.6
Sample C Male 42.0
Sample D Male 42.5
Dorsal hippocampus
nTPM: 54.9
Samples: 4

Max nTPM: 65.5
Min nTPM: 46.4
Sample A Female 65.5
Sample B Female 55.1
Sample C Male 52.6
Sample D Male 46.4
Entorhinal cortex
nTPM: 49.6
Samples: 4

Max nTPM: 55.9
Min nTPM: 41.8
Sample A Female 51.7
Sample B Female 55.9
Sample C Male 49.0
Sample D Male 41.8
Ventral hippocampus
nTPM: 49.6
Samples: 4

Max nTPM: 58.1
Min nTPM: 43.1
Sample A Female 58.1
Sample B Female 44.8
Sample C Male 43.1
Sample D Male 52.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 70.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 64.5
Samples: 4

Max nTPM: 67.9
Min nTPM: 61.0
Sample A Male 62.9
Sample B Male 67.9
Sample C Female 66.2
Sample D Female 61.0
Hippocampal formation
nTPM: 70.6
Samples: 4

Max nTPM: 76.8
Min nTPM: 65.7
Sample A Male 76.8
Sample B Male 68.8
Sample C Female 70.9
Sample D Female 65.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.7
413804 Antisense, RP_040809_01_F03, Mouse strain C57BL/6J (56 days, male) 4.7

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