HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:10.3 nTPM
HPA Brain:81.9 nTPM
GTEx:10.3 nTPM
FANTOM5:110.4 Scaled Tags Per Million
Pig:42.8 nTPM
Mouse:14.7 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA011846
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 81.9
Sample id Sample description nTPM
Hippocampus
nTPM: 81.9
2529 Female, age 94, left hemisphere 106.8
2148 Female, age 91, left hemisphere 86.2
1855 Male, age 76, left hemisphere 85.2
1898 Male, age 80, left hemisphere 81.4
1911 Female, age 85, right hemisphere 75.4
2621 Female, age 67, right hemisphere 56.3
Dentate gyrus
nTPM: 73.1
2528 Male, age 74, both hemispheres 101.8
2010 Male, age 76, both hemispheres 84.6
2246 Female, age 85, both hemispheres 72.7
2530 Female, age 94, left hemisphere 67.1
1927 Female, age 91, both hemispheres 57.3
2531 Female, age 67, both hemispheres 55.3
Entorhinal gyrus
nTPM: 80.7
2117 Female, age 91, right hemisphere 141.5
1787 Male, age 76, left hemisphere 90.4
1938 Female, age 85, left hemisphere 73.9
2686 Male, age 75, right hemisphere 70.1
2764 Male, age 80, right hemisphere 61.5
2613 Female, age 94, left hemisphere 47.1
Hippocampus, CA1
nTPM: 69.5
2527 Male, age 74, both hemispheres 89.2
2045 Male, age 76, both hemispheres 70.4
1873 Female, age 85, both hemispheres 69.8
2082 Female, age 91, right hemisphere 59.3
2749 Male, age 80, left hemisphere 58.6
Hippocampus, CA2
nTPM: 72.0
2113 Female, age 91, right hemisphere 79.8
1940 Female, age 85, left hemisphere 79.0
2249 Male, age 74, both hemispheres 77.0
1963 Male, age 80, left hemisphere 73.2
2437 Female, age 94, left hemisphere 68.0
1892 Male, age 76, both hemispheres 54.9
Hippocampus, CA3
nTPM: 65.5
1891 Female, age 85, both hemispheres 82.6
1867 Male, age 76, both hemispheres 72.6
2436 Male, age 74, both hemispheres 69.8
2861 Female, age 67, both hemispheres 61.0
2137 Male, age 80, left hemisphere 53.6
2620 Female, age 94, left hemisphere 53.2
Parahippocampal cortex
nTPM: 67.7
2250 Female, age 67, right hemisphere 86.0
2018 Male, age 76, both hemispheres 85.7
2692 Male, age 74, both hemispheres 81.7
1933 Female, age 85, both hemispheres 73.1
1990 Female, age 91, right hemisphere 70.7
2245 Female, age 91, both hemispheres 67.3
2622 Female, age 67, right hemisphere 59.5
2693 Female, age 94, both hemispheres 52.7
1850 Male, age 80, both hemispheres 51.4
2532 Female, age 72, left hemisphere 48.9
Perirhinal gyrus
nTPM: 57.6
2521 Female, age 94, right hemisphere 64.6
1841 Female, age 85, right hemisphere 60.4
1794 Male, age 80, right hemisphere 57.4
1847 Female, age 91, left hemisphere 54.8
2848 Male, age 76, right hemisphere 51.0
Subiculum
nTPM: 80.7
2729 Female, age 91, right hemisphere 112.1
2619 Male, age 74, both hemispheres 82.3
2042 Male, age 76, both hemispheres 81.3
1977 Female, age 85, both hemispheres 75.1
1901 Male, age 80, both hemispheres 72.2
2438 Female, age 94, left hemisphere 61.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.3
Samples: 197

Max nTPM: 45.1
Min nTPM: 0.8
Std nTPM: 7.4
Median nTPM: 8.9
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 45.1
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 42.3
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 40.8
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 36.5
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 35.4
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 34.5
GTEX-1I1GQ-0011-R1a-SM-CY8GG 50-59 years, male 30.1
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 28.3
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 25.0
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 22.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 21.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 110.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 110.4
FF:10153-102I9 76 years, female 135.6
FF:10169-103B7 60 years, female 85.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 42.8
Pig sample Sample description nTPM
Subiculum
nTPM: 42.8
Samples: 4

Max nTPM: 45.9
Min nTPM: 39.2
Sample A Female 45.9
Sample B Female 43.1
Sample C Male 42.9
Sample D Male 39.2
Dorsal hippocampus
nTPM: 40.8
Samples: 4

Max nTPM: 43.7
Min nTPM: 38.7
Sample A Female 43.7
Sample B Female 38.7
Sample C Male 40.9
Sample D Male 39.9
Entorhinal cortex
nTPM: 29.5
Samples: 4

Max nTPM: 33.3
Min nTPM: 26.5
Sample A Female 30.7
Sample B Female 27.6
Sample C Male 33.3
Sample D Male 26.5
Ventral hippocampus
nTPM: 41.1
Samples: 4

Max nTPM: 49.0
Min nTPM: 33.9
Sample A Female 36.3
Sample B Female 33.9
Sample C Male 49.0
Sample D Male 45.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 14.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 14.7
Samples: 4

Max nTPM: 17.0
Min nTPM: 12.7
Sample A Male 12.7
Sample B Male 12.7
Sample C Female 16.3
Sample D Female 17.0
Hippocampal formation
nTPM: 12.9
Samples: 4

Max nTPM: 13.6
Min nTPM: 12.3
Sample A Male 13.6
Sample B Male 12.3
Sample C Female 13.5
Sample D Female 12.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
1371 Antisense, RP_Baylor_102861, Mouse strain C57BL/6J (56 days, male) 0.3
1372 Antisense, RP_Baylor_102861, Mouse strain C57BL/6J (56 days, male) 0.2

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