HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:34.7 nTPM
HPA Brain:89.5 nTPM
GTEx:34.7 nTPM
FANTOM5:74.9 Scaled Tags Per Million
Pig:155.7 nTPM
Mouse:147.0 nTPM
Allen mouse:15.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB009624
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 89.5
Sample id Sample description nTPM
Hippocampus
nTPM: 49.8
1898 Male, age 80, left hemisphere 88.2
1855 Male, age 76, left hemisphere 56.0
1911 Female, age 85, right hemisphere 49.0
2621 Female, age 67, right hemisphere 42.7
2148 Female, age 91, left hemisphere 38.8
2529 Female, age 94, left hemisphere 24.0
Dentate gyrus
nTPM: 46.1
1927 Female, age 91, both hemispheres 86.9
2010 Male, age 76, both hemispheres 56.1
2246 Female, age 85, both hemispheres 48.8
2531 Female, age 67, both hemispheres 32.2
2530 Female, age 94, left hemisphere 28.7
2528 Male, age 74, both hemispheres 23.7
Entorhinal gyrus
nTPM: 42.6
1938 Female, age 85, left hemisphere 61.6
2613 Female, age 94, left hemisphere 52.1
2764 Male, age 80, right hemisphere 47.4
1787 Male, age 76, left hemisphere 37.9
2686 Male, age 75, right hemisphere 30.1
2117 Female, age 91, right hemisphere 26.2
Hippocampus, CA1
nTPM: 89.5
2749 Male, age 80, left hemisphere 203.8
2045 Male, age 76, both hemispheres 80.4
2082 Female, age 91, right hemisphere 62.4
1873 Female, age 85, both hemispheres 59.8
2527 Male, age 74, both hemispheres 41.0
Hippocampus, CA2
nTPM: 56.0
1892 Male, age 76, both hemispheres 88.3
1963 Male, age 80, left hemisphere 84.1
2113 Female, age 91, right hemisphere 43.7
2249 Male, age 74, both hemispheres 41.8
1940 Female, age 85, left hemisphere 40.9
2437 Female, age 94, left hemisphere 37.0
Hippocampus, CA3
nTPM: 73.2
2137 Male, age 80, left hemisphere 171.2
1867 Male, age 76, both hemispheres 101.7
2436 Male, age 74, both hemispheres 46.1
2620 Female, age 94, left hemisphere 42.9
1891 Female, age 85, both hemispheres 42.2
2861 Female, age 67, both hemispheres 34.8
Parahippocampal cortex
nTPM: 41.5
2245 Female, age 91, both hemispheres 66.3
1850 Male, age 80, both hemispheres 56.5
1933 Female, age 85, both hemispheres 47.6
2693 Female, age 94, both hemispheres 45.3
1990 Female, age 91, right hemisphere 42.9
2018 Male, age 76, both hemispheres 39.9
2250 Female, age 67, right hemisphere 39.6
2532 Female, age 72, left hemisphere 34.4
2622 Female, age 67, right hemisphere 25.9
2692 Male, age 74, both hemispheres 16.7
Perirhinal gyrus
nTPM: 66.8
1847 Female, age 91, left hemisphere 82.3
2521 Female, age 94, right hemisphere 69.9
1794 Male, age 80, right hemisphere 65.0
1841 Female, age 85, right hemisphere 61.9
2848 Male, age 76, right hemisphere 54.8
Subiculum
nTPM: 48.1
1901 Male, age 80, both hemispheres 86.2
1977 Female, age 85, both hemispheres 62.3
2042 Male, age 76, both hemispheres 57.2
2438 Female, age 94, left hemisphere 32.4
2729 Female, age 91, right hemisphere 27.9
2619 Male, age 74, both hemispheres 22.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 34.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 34.7
Samples: 197

Max nTPM: 121.8
Min nTPM: 3.2
Std nTPM: 23.8
Median nTPM: 29.9
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 121.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 118.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 110.4
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 107.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 89.1
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 87.3
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 85.8
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 85.1
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 84.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 83.8
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 83.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 74.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 74.9
FF:10169-103B7 60 years, female 99.7
FF:10153-102I9 76 years, female 50.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 155.7
Pig sample Sample description nTPM
Subiculum
nTPM: 107.3
Samples: 4

Max nTPM: 126.9
Min nTPM: 84.9
Sample A Female 126.9
Sample B Female 97.8
Sample C Male 119.7
Sample D Male 84.9
Dorsal hippocampus
nTPM: 155.8
Samples: 4

Max nTPM: 186.5
Min nTPM: 121.9
Sample A Female 182.7
Sample B Female 186.5
Sample C Male 131.9
Sample D Male 121.9
Entorhinal cortex
nTPM: 83.4
Samples: 4

Max nTPM: 94.6
Min nTPM: 76.5
Sample A Female 94.6
Sample B Female 82.7
Sample C Male 79.9
Sample D Male 76.5
Ventral hippocampus
nTPM: 135.5
Samples: 4

Max nTPM: 236.1
Min nTPM: 80.8
Sample A Female 125.2
Sample B Female 80.8
Sample C Male 99.9
Sample D Male 236.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 147.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 134.2
Samples: 4

Max nTPM: 147.1
Min nTPM: 123.6
Sample A Male 123.8
Sample B Male 147.1
Sample C Female 123.6
Sample D Female 142.4
Hippocampal formation
nTPM: 147.0
Samples: 4

Max nTPM: 169.3
Min nTPM: 121.6
Sample A Male 143.2
Sample B Male 153.8
Sample C Female 169.3
Sample D Female 121.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 15.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.5
74743272 Antisense, RP_060220_04_E08, Mouse strain C57BL/6J (56 days, male) 16.2
69783322 Antisense, RP_050505_04_G07, Mouse strain C57BL/6J (56 days, male) 14.8

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