HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:6.3 nTPM
HPA Brain:13.7 nTPM
GTEx:6.3 nTPM
FANTOM5:17.6 Scaled Tags Per Million
Pig:9.2 nTPM
Mouse:17.1 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042402
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.7
Sample id Sample description nTPM
Hippocampus
nTPM: 13.7
1855 Male, age 76, left hemisphere 16.8
1898 Male, age 80, left hemisphere 15.0
2621 Female, age 67, right hemisphere 14.5
1911 Female, age 85, right hemisphere 12.2
2529 Female, age 94, left hemisphere 12.1
2148 Female, age 91, left hemisphere 11.8
Dentate gyrus
nTPM: 11.5
2530 Female, age 94, left hemisphere 13.0
2010 Male, age 76, both hemispheres 12.4
2246 Female, age 85, both hemispheres 11.4
2528 Male, age 74, both hemispheres 11.4
1927 Female, age 91, both hemispheres 10.8
2531 Female, age 67, both hemispheres 10.3
Entorhinal gyrus
nTPM: 11.1
2117 Female, age 91, right hemisphere 15.7
1787 Male, age 76, left hemisphere 12.2
2613 Female, age 94, left hemisphere 10.5
1938 Female, age 85, left hemisphere 10.4
2686 Male, age 75, right hemisphere 9.3
2764 Male, age 80, right hemisphere 8.7
Hippocampus, CA1
nTPM: 11.3
2082 Female, age 91, right hemisphere 13.0
1873 Female, age 85, both hemispheres 12.6
2045 Male, age 76, both hemispheres 11.7
2527 Male, age 74, both hemispheres 10.2
2749 Male, age 80, left hemisphere 9.2
Hippocampus, CA2
nTPM: 13.1
1940 Female, age 85, left hemisphere 15.7
1892 Male, age 76, both hemispheres 14.3
1963 Male, age 80, left hemisphere 13.5
2113 Female, age 91, right hemisphere 13.0
2437 Female, age 94, left hemisphere 12.8
2249 Male, age 74, both hemispheres 9.4
Hippocampus, CA3
nTPM: 11.4
1867 Male, age 76, both hemispheres 15.6
1891 Female, age 85, both hemispheres 12.5
2861 Female, age 67, both hemispheres 12.5
2436 Male, age 74, both hemispheres 11.0
2137 Male, age 80, left hemisphere 8.8
2620 Female, age 94, left hemisphere 8.1
Parahippocampal cortex
nTPM: 10.5
2250 Female, age 67, right hemisphere 14.7
2018 Male, age 76, both hemispheres 13.9
2693 Female, age 94, both hemispheres 10.3
1990 Female, age 91, right hemisphere 10.1
2532 Female, age 72, left hemisphere 10.1
1850 Male, age 80, both hemispheres 9.8
2692 Male, age 74, both hemispheres 9.1
2245 Female, age 91, both hemispheres 8.9
2622 Female, age 67, right hemisphere 8.9
1933 Female, age 85, both hemispheres 8.7
Perirhinal gyrus
nTPM: 9.7
2521 Female, age 94, right hemisphere 10.5
1841 Female, age 85, right hemisphere 9.9
1794 Male, age 80, right hemisphere 9.5
2848 Male, age 76, right hemisphere 9.4
1847 Female, age 91, left hemisphere 9.1
Subiculum
nTPM: 13.1
2729 Female, age 91, right hemisphere 16.5
2042 Male, age 76, both hemispheres 16.0
2438 Female, age 94, left hemisphere 13.1
1901 Male, age 80, both hemispheres 11.8
2619 Male, age 74, both hemispheres 11.2
1977 Female, age 85, both hemispheres 9.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 6.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 6.3
Samples: 197

Max nTPM: 35.7
Min nTPM: 2.5
Std nTPM: 3.1
Median nTPM: 5.8
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 35.7
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 15.7
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 15.2
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 14.5
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 13.6
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 13.2
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 11.8
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 11.2
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 11.0
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 10.6
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 10.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 17.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 17.6
FF:10153-102I9 76 years, female 28.0
FF:10169-103B7 60 years, female 7.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 9.2
Pig sample Sample description nTPM
Subiculum
nTPM: 8.8
Samples: 4

Max nTPM: 9.4
Min nTPM: 8.4
Sample A Female 9.4
Sample B Female 8.4
Sample C Male 8.5
Sample D Male 8.9
Dorsal hippocampus
nTPM: 9.2
Samples: 4

Max nTPM: 11.4
Min nTPM: 7.1
Sample A Female 8.7
Sample B Female 9.7
Sample C Male 7.1
Sample D Male 11.4
Entorhinal cortex
nTPM: 8.3
Samples: 4

Max nTPM: 9.0
Min nTPM: 6.3
Sample A Female 8.9
Sample B Female 9.0
Sample C Male 8.9
Sample D Male 6.3
Ventral hippocampus
nTPM: 9.0
Samples: 4

Max nTPM: 10.0
Min nTPM: 8.0
Sample A Female 8.0
Sample B Female 8.1
Sample C Male 10.0
Sample D Male 9.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 17.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 10.2
Samples: 4

Max nTPM: 12.2
Min nTPM: 8.3
Sample A Male 10.1
Sample B Male 8.3
Sample C Female 12.2
Sample D Female 10.2
Hippocampal formation
nTPM: 17.1
Samples: 4

Max nTPM: 19.7
Min nTPM: 14.8
Sample A Male 14.8
Sample B Male 19.7
Sample C Female 19.0
Sample D Female 14.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
75695670 Antisense, RP_060518_04_D09, Mouse strain C57BL/6J (56 days, male) 0.5
72007934 Antisense, RP_051017_01_B03, Mouse strain C57BL/6J (56 days, male) 0.4

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