HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:1.2 nTPM
HPA Brain:1.8 nTPM
GTEx:1.2 nTPM
FANTOM5:1.5 Scaled Tags Per Million
Pig:1.9 nTPM
Mouse:5.6 nTPM
Allen mouse:1.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA010554
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 1.8
Sample id Sample description nTPM
Hippocampus
nTPM: 0.9
2529 Female, age 94, left hemisphere 1.5
1898 Male, age 80, left hemisphere 1.4
1911 Female, age 85, right hemisphere 0.8
2621 Female, age 67, right hemisphere 0.8
2148 Female, age 91, left hemisphere 0.7
1855 Male, age 76, left hemisphere 0.3
Dentate gyrus
nTPM: 1.3
2530 Female, age 94, left hemisphere 3.0
2528 Male, age 74, both hemispheres 1.9
2010 Male, age 76, both hemispheres 1.2
2531 Female, age 67, both hemispheres 0.9
1927 Female, age 91, both hemispheres 0.7
2246 Female, age 85, both hemispheres 0.0
Entorhinal gyrus
nTPM: 0.6
2117 Female, age 91, right hemisphere 1.1
2686 Male, age 75, right hemisphere 0.9
2613 Female, age 94, left hemisphere 0.5
1938 Female, age 85, left hemisphere 0.4
2764 Male, age 80, right hemisphere 0.4
1787 Male, age 76, left hemisphere 0.2
Hippocampus, CA1
nTPM: 0.7
2749 Male, age 80, left hemisphere 1.2
2527 Male, age 74, both hemispheres 1.0
2082 Female, age 91, right hemisphere 0.9
2045 Male, age 76, both hemispheres 0.4
1873 Female, age 85, both hemispheres 0.2
Hippocampus, CA2
nTPM: 1.6
2437 Female, age 94, left hemisphere 2.5
1940 Female, age 85, left hemisphere 1.7
1892 Male, age 76, both hemispheres 1.5
2249 Male, age 74, both hemispheres 1.5
2113 Female, age 91, right hemisphere 1.2
1963 Male, age 80, left hemisphere 1.0
Hippocampus, CA3
nTPM: 1.1
2137 Male, age 80, left hemisphere 1.6
1867 Male, age 76, both hemispheres 1.5
2436 Male, age 74, both hemispheres 1.2
2861 Female, age 67, both hemispheres 1.0
1891 Female, age 85, both hemispheres 0.7
2620 Female, age 94, left hemisphere 0.6
Parahippocampal cortex
nTPM: 1.6
2532 Female, age 72, left hemisphere 3.5
2622 Female, age 67, right hemisphere 3.0
1850 Male, age 80, both hemispheres 1.5
2693 Female, age 94, both hemispheres 1.5
2018 Male, age 76, both hemispheres 1.3
2245 Female, age 91, both hemispheres 1.3
1990 Female, age 91, right hemisphere 1.1
1933 Female, age 85, both hemispheres 0.9
2692 Male, age 74, both hemispheres 0.8
2250 Female, age 67, right hemisphere 0.6
Perirhinal gyrus
nTPM: 1.8
1794 Male, age 80, right hemisphere 3.6
1841 Female, age 85, right hemisphere 3.0
2521 Female, age 94, right hemisphere 1.0
2848 Male, age 76, right hemisphere 0.8
1847 Female, age 91, left hemisphere 0.6
Subiculum
nTPM: 1.2
2438 Female, age 94, left hemisphere 2.4
2042 Male, age 76, both hemispheres 1.7
2619 Male, age 74, both hemispheres 1.3
1901 Male, age 80, both hemispheres 1.1
2729 Female, age 91, right hemisphere 0.7
1977 Female, age 85, both hemispheres 0.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 1.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 1.2
Samples: 197

Max nTPM: 9.5
Min nTPM: 0.2
Std nTPM: 1.0
Median nTPM: 1.0
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 9.5
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 6.0
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 4.7
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 4.5
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 3.4
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 3.1
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 3.0
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 2.9
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 2.8
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 2.8
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 2.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 1.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1.5
FF:10153-102I9 76 years, female 3.0
FF:10169-103B7 60 years, female 0.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 1.9
Pig sample Sample description nTPM
Subiculum
nTPM: 1.6
Samples: 4

Max nTPM: 2.1
Min nTPM: 1.4
Sample A Female 2.1
Sample B Female 1.4
Sample C Male 1.4
Sample D Male 1.6
Dorsal hippocampus
nTPM: 0.7
Samples: 4

Max nTPM: 1.3
Min nTPM: 0.3
Sample A Female 1.3
Sample B Female 0.4
Sample C Male 0.8
Sample D Male 0.3
Entorhinal cortex
nTPM: 1.9
Samples: 4

Max nTPM: 4.3
Min nTPM: 0.5
Sample A Female 2.0
Sample B Female 4.3
Sample C Male 0.9
Sample D Male 0.5
Ventral hippocampus
nTPM: 1.7
Samples: 4

Max nTPM: 3.8
Min nTPM: 0.6
Sample A Female 3.8
Sample B Female 0.6
Sample C Male 1.3
Sample D Male 1.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 5.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 5.6
Samples: 4

Max nTPM: 6.5
Min nTPM: 4.7
Sample A Male 4.7
Sample B Male 6.5
Sample C Female 5.5
Sample D Female 5.8
Hippocampal formation
nTPM: 2.5
Samples: 4

Max nTPM: 2.7
Min nTPM: 2.1
Sample A Male 2.7
Sample B Male 2.6
Sample C Female 2.1
Sample D Female 2.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.6
76085743 Antisense, RP_060530_01_F03, Mouse strain C57BL/6J (56 days, male) 2.1
69015374 Antisense, RP_050310_02_H01, Mouse strain C57BL/6J (56 days, male) 1.1

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