HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:32.9 nTPM
HPA Brain:67.1 nTPM
GTEx:32.9 nTPM
FANTOM5:188.6 Scaled Tags Per Million
Pig:67.1 nTPM
Mouse:52.9 nTPM
Allen mouse:11.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030751Antibody HPA030752Antibody HPA030754Antibody CAB034099
Glial cells Not detectedNot detectedNot detectedLow
Neuronal cells MediumNot detectedHighMedium









HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 67.1
Sample id Sample description nTPM
Hippocampus
nTPM: 59.4
1855 Male, age 76, left hemisphere 64.8
2621 Female, age 67, right hemisphere 64.5
1898 Male, age 80, left hemisphere 62.8
2148 Female, age 91, left hemisphere 60.4
1911 Female, age 85, right hemisphere 57.4
2529 Female, age 94, left hemisphere 46.6
Dentate gyrus
nTPM: 58.4
1927 Female, age 91, both hemispheres 66.8
2010 Male, age 76, both hemispheres 66.4
2531 Female, age 67, both hemispheres 65.0
2528 Male, age 74, both hemispheres 58.4
2246 Female, age 85, both hemispheres 54.8
2530 Female, age 94, left hemisphere 38.8
Entorhinal gyrus
nTPM: 56.5
1938 Female, age 85, left hemisphere 61.5
2764 Male, age 80, right hemisphere 61.0
2613 Female, age 94, left hemisphere 57.2
2117 Female, age 91, right hemisphere 53.7
2686 Male, age 75, right hemisphere 53.2
1787 Male, age 76, left hemisphere 52.4
Hippocampus, CA1
nTPM: 67.1
2749 Male, age 80, left hemisphere 84.0
2045 Male, age 76, both hemispheres 74.6
1873 Female, age 85, both hemispheres 65.4
2082 Female, age 91, right hemisphere 58.4
2527 Male, age 74, both hemispheres 53.0
Hippocampus, CA2
nTPM: 57.3
1892 Male, age 76, both hemispheres 75.5
1963 Male, age 80, left hemisphere 60.5
1940 Female, age 85, left hemisphere 60.1
2113 Female, age 91, right hemisphere 52.7
2249 Male, age 74, both hemispheres 51.0
2437 Female, age 94, left hemisphere 44.0
Hippocampus, CA3
nTPM: 64.8
1867 Male, age 76, both hemispheres 81.5
2137 Male, age 80, left hemisphere 70.4
2620 Female, age 94, left hemisphere 64.2
1891 Female, age 85, both hemispheres 61.0
2436 Male, age 74, both hemispheres 59.9
2861 Female, age 67, both hemispheres 52.0
Parahippocampal cortex
nTPM: 62.0
2693 Female, age 94, both hemispheres 69.6
1850 Male, age 80, both hemispheres 69.2
2018 Male, age 76, both hemispheres 67.2
2532 Female, age 72, left hemisphere 63.4
2622 Female, age 67, right hemisphere 62.7
1933 Female, age 85, both hemispheres 62.6
2245 Female, age 91, both hemispheres 60.4
2250 Female, age 67, right hemisphere 58.5
1990 Female, age 91, right hemisphere 55.0
2692 Male, age 74, both hemispheres 51.6
Perirhinal gyrus
nTPM: 66.9
1841 Female, age 85, right hemisphere 79.9
1847 Female, age 91, left hemisphere 65.8
2521 Female, age 94, right hemisphere 65.8
1794 Male, age 80, right hemisphere 63.6
2848 Male, age 76, right hemisphere 59.5
Subiculum
nTPM: 57.4
2042 Male, age 76, both hemispheres 60.9
1901 Male, age 80, both hemispheres 59.0
2729 Female, age 91, right hemisphere 59.0
1977 Female, age 85, both hemispheres 56.8
2438 Female, age 94, left hemisphere 56.8
2619 Male, age 74, both hemispheres 51.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 32.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 32.9
Samples: 197

Max nTPM: 57.7
Min nTPM: 15.1
Std nTPM: 7.0
Median nTPM: 31.9
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 57.7
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 56.1
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 52.9
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 52.8
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 49.5
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 47.8
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 46.5
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 46.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 45.9
GTEX-S7SE-0011-R1A-SM-2XCDE 50-59 years, male 45.2
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 44.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 188.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 188.6
FF:10169-103B7 60 years, female 190.0
FF:10153-102I9 76 years, female 187.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 67.1
Pig sample Sample description nTPM
Subiculum
nTPM: 60.9
Samples: 4

Max nTPM: 63.5
Min nTPM: 59.1
Sample A Female 59.1
Sample B Female 60.9
Sample C Male 60.1
Sample D Male 63.5
Dorsal hippocampus
nTPM: 67.1
Samples: 4

Max nTPM: 80.1
Min nTPM: 59.3
Sample A Female 59.3
Sample B Female 68.6
Sample C Male 60.2
Sample D Male 80.1
Entorhinal cortex
nTPM: 61.6
Samples: 4

Max nTPM: 63.7
Min nTPM: 60.2
Sample A Female 60.2
Sample B Female 63.7
Sample C Male 61.7
Sample D Male 60.6
Ventral hippocampus
nTPM: 61.2
Samples: 4

Max nTPM: 65.4
Min nTPM: 52.7
Sample A Female 65.4
Sample B Female 63.9
Sample C Male 52.7
Sample D Male 62.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 52.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 51.2
Samples: 4

Max nTPM: 61.2
Min nTPM: 43.4
Sample A Male 48.4
Sample B Male 61.2
Sample C Female 51.6
Sample D Female 43.4
Hippocampal formation
nTPM: 52.9
Samples: 4

Max nTPM: 59.1
Min nTPM: 47.3
Sample A Male 56.7
Sample B Male 59.1
Sample C Female 47.3
Sample D Female 48.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.4
759 Antisense, RP_Baylor_103330, Mouse strain C57BL/6J (56 days, male) 11.4
758 Antisense, RP_Baylor_103330, Mouse strain C57BL/6J (56 days, male) 8.2

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