HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:4.4 nTPM
HPA Brain:4.4 nTPM
GTEx:4.4 nTPM
FANTOM5:10.8 Scaled Tags Per Million
Pig:5.5 nTPM
Mouse:0.2 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA000896Antibody HPA001374
Glial cells MediumNot detected
Neuronal cells MediumNot detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 4.4
Sample id Sample description nTPM
Hippocampus
nTPM: 3.0
1911 Female, age 85, right hemisphere 3.6
1898 Male, age 80, left hemisphere 3.5
2621 Female, age 67, right hemisphere 3.3
1855 Male, age 76, left hemisphere 3.1
2148 Female, age 91, left hemisphere 2.6
2529 Female, age 94, left hemisphere 2.2
Dentate gyrus
nTPM: 3.9
1927 Female, age 91, both hemispheres 6.2
2010 Male, age 76, both hemispheres 5.3
2528 Male, age 74, both hemispheres 3.3
2246 Female, age 85, both hemispheres 2.9
2530 Female, age 94, left hemisphere 2.9
2531 Female, age 67, both hemispheres 2.8
Entorhinal gyrus
nTPM: 2.4
1938 Female, age 85, left hemisphere 3.0
2117 Female, age 91, right hemisphere 2.8
2764 Male, age 80, right hemisphere 2.8
2686 Male, age 75, right hemisphere 2.4
2613 Female, age 94, left hemisphere 1.9
1787 Male, age 76, left hemisphere 1.7
Hippocampus, CA1
nTPM: 4.4
2045 Male, age 76, both hemispheres 6.2
1873 Female, age 85, both hemispheres 5.7
2749 Male, age 80, left hemisphere 4.0
2527 Male, age 74, both hemispheres 3.4
2082 Female, age 91, right hemisphere 2.5
Hippocampus, CA2
nTPM: 3.9
1892 Male, age 76, both hemispheres 8.1
1963 Male, age 80, left hemisphere 4.3
2249 Male, age 74, both hemispheres 3.8
2113 Female, age 91, right hemisphere 2.5
1940 Female, age 85, left hemisphere 2.4
2437 Female, age 94, left hemisphere 2.2
Hippocampus, CA3
nTPM: 3.4
1867 Male, age 76, both hemispheres 6.5
1891 Female, age 85, both hemispheres 4.3
2620 Female, age 94, left hemisphere 2.9
2436 Male, age 74, both hemispheres 2.6
2137 Male, age 80, left hemisphere 2.5
2861 Female, age 67, both hemispheres 1.6
Parahippocampal cortex
nTPM: 2.6
2693 Female, age 94, both hemispheres 4.0
1850 Male, age 80, both hemispheres 3.3
1933 Female, age 85, both hemispheres 3.1
2250 Female, age 67, right hemisphere 2.8
2692 Male, age 74, both hemispheres 2.6
2018 Male, age 76, both hemispheres 2.5
2245 Female, age 91, both hemispheres 2.2
1990 Female, age 91, right hemisphere 2.1
2532 Female, age 72, left hemisphere 2.0
2622 Female, age 67, right hemisphere 1.2
Perirhinal gyrus
nTPM: 3.2
1794 Male, age 80, right hemisphere 3.8
2521 Female, age 94, right hemisphere 3.5
2848 Male, age 76, right hemisphere 3.4
1841 Female, age 85, right hemisphere 2.8
1847 Female, age 91, left hemisphere 2.6
Subiculum
nTPM: 2.5
2042 Male, age 76, both hemispheres 4.2
1901 Male, age 80, both hemispheres 3.4
1977 Female, age 85, both hemispheres 2.2
2729 Female, age 91, right hemisphere 2.1
2619 Male, age 74, both hemispheres 1.8
2438 Female, age 94, left hemisphere 1.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 4.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 4.4
Samples: 197

Max nTPM: 8.6
Min nTPM: 1.6
Std nTPM: 1.2
Median nTPM: 4.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 8.6
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 8.5
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 7.6
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 7.4
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 7.4
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 7.4
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 7.3
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 7.3
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 7.0
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 6.8
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 6.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 10.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 10.8
FF:10169-103B7 60 years, female 14.5
FF:10153-102I9 76 years, female 7.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 5.5
Pig sample Sample description nTPM
Subiculum
nTPM: 3.3
Samples: 4

Max nTPM: 5.6
Min nTPM: 1.8
Sample A Female 5.6
Sample B Female 3.3
Sample C Male 1.8
Sample D Male 2.5
Dorsal hippocampus
nTPM: 5.5
Samples: 4

Max nTPM: 7.3
Min nTPM: 3.7
Sample A Female 7.3
Sample B Female 5.0
Sample C Male 6.0
Sample D Male 3.7
Entorhinal cortex
nTPM: 2.7
Samples: 4

Max nTPM: 3.3
Min nTPM: 2.4
Sample A Female 2.7
Sample B Female 3.3
Sample C Male 2.5
Sample D Male 2.4
Ventral hippocampus
nTPM: 4.2
Samples: 4

Max nTPM: 5.4
Min nTPM: 3.7
Sample A Female 5.4
Sample B Female 4.0
Sample C Male 3.8
Sample D Male 3.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 0.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 0.2
Samples: 4

Max nTPM: 0.3
Min nTPM: 0.2
Sample A Male 0.2
Sample B Male 0.3
Sample C Female 0.2
Sample D Female 0.2
Hippocampal formation
nTPM: 0.2
Samples: 4

Max nTPM: 0.3
Min nTPM: 0.1
Sample A Male 0.1
Sample B Male 0.3
Sample C Female 0.2
Sample D Female 0.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
70238651 Antisense, RP_050526_03_F06, Mouse strain C57BL/6J (56 days, male) 0.2

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