HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:38.0 nTPM
HPA Brain:51.8 nTPM
GTEx:38.0 nTPM
FANTOM5:117.4 Scaled Tags Per Million
Mouse:27.5 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA057707
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 51.8
Sample id Sample description nTPM
Hippocampus
nTPM: 51.8
2529 Female, age 94, left hemisphere 61.2
2148 Female, age 91, left hemisphere 52.4
1911 Female, age 85, right hemisphere 52.2
1898 Male, age 80, left hemisphere 50.8
2621 Female, age 67, right hemisphere 49.7
1855 Male, age 76, left hemisphere 44.9
Dentate gyrus
nTPM: 50.8
2246 Female, age 85, both hemispheres 53.4
2531 Female, age 67, both hemispheres 52.6
2530 Female, age 94, left hemisphere 52.2
2010 Male, age 76, both hemispheres 51.0
2528 Male, age 74, both hemispheres 49.0
1927 Female, age 91, both hemispheres 46.3
Entorhinal gyrus
nTPM: 47.4
2117 Female, age 91, right hemisphere 58.0
1938 Female, age 85, left hemisphere 52.0
2764 Male, age 80, right hemisphere 50.3
2686 Male, age 75, right hemisphere 45.1
1787 Male, age 76, left hemisphere 41.4
2613 Female, age 94, left hemisphere 37.4
Hippocampus, CA1
nTPM: 51.4
2527 Male, age 74, both hemispheres 55.8
1873 Female, age 85, both hemispheres 55.1
2749 Male, age 80, left hemisphere 52.1
2082 Female, age 91, right hemisphere 51.9
2045 Male, age 76, both hemispheres 41.9
Hippocampus, CA2
nTPM: 50.1
2249 Male, age 74, both hemispheres 56.0
2437 Female, age 94, left hemisphere 53.4
2113 Female, age 91, right hemisphere 50.5
1940 Female, age 85, left hemisphere 49.6
1963 Male, age 80, left hemisphere 47.3
1892 Male, age 76, both hemispheres 43.8
Hippocampus, CA3
nTPM: 48.4
1891 Female, age 85, both hemispheres 55.4
2436 Male, age 74, both hemispheres 51.6
1867 Male, age 76, both hemispheres 48.1
2137 Male, age 80, left hemisphere 47.9
2861 Female, age 67, both hemispheres 45.1
2620 Female, age 94, left hemisphere 42.3
Parahippocampal cortex
nTPM: 48.0
1990 Female, age 91, right hemisphere 53.5
2245 Female, age 91, both hemispheres 51.7
1850 Male, age 80, both hemispheres 50.0
2250 Female, age 67, right hemisphere 49.0
2532 Female, age 72, left hemisphere 48.0
1933 Female, age 85, both hemispheres 47.6
2018 Male, age 76, both hemispheres 47.5
2692 Male, age 74, both hemispheres 46.9
2622 Female, age 67, right hemisphere 44.3
2693 Female, age 94, both hemispheres 41.7
Perirhinal gyrus
nTPM: 47.9
1841 Female, age 85, right hemisphere 51.9
1847 Female, age 91, left hemisphere 51.0
1794 Male, age 80, right hemisphere 47.3
2521 Female, age 94, right hemisphere 46.5
2848 Male, age 76, right hemisphere 43.1
Subiculum
nTPM: 50.7
1977 Female, age 85, both hemispheres 57.1
1901 Male, age 80, both hemispheres 54.0
2042 Male, age 76, both hemispheres 50.7
2438 Female, age 94, left hemisphere 48.5
2729 Female, age 91, right hemisphere 47.2
2619 Male, age 74, both hemispheres 46.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 38.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 38.0
Samples: 197

Max nTPM: 58.0
Min nTPM: 19.0
Std nTPM: 7.1
Median nTPM: 37.9
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 58.0
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 56.3
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 56.2
GTEX-1H1DG-0011-R1b-SM-CKZP1 70-79 years, male 54.8
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 54.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 54.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 53.0
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 52.9
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 52.1
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 52.1
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 51.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 117.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 117.4
FF:10169-103B7 60 years, female 125.6
FF:10153-102I9 76 years, female 109.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 27.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 23.7
Samples: 4

Max nTPM: 27.2
Min nTPM: 21.8
Sample A Male 27.2
Sample B Male 22.8
Sample C Female 22.8
Sample D Female 21.8
Hippocampal formation
nTPM: 27.5
Samples: 4

Max nTPM: 31.0
Min nTPM: 26.2
Sample A Male 31.0
Sample B Male 26.4
Sample C Female 26.4
Sample D Female 26.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
75043154 Antisense, RP_060412_05_B05, Mouse strain C57BL/6J (56 days, male) 0.7
71724660 Antisense, RP_050921_01_D06, Mouse strain C57BL/6J (56 days, male) 0.2

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