HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:15.9 nTPM
HPA Brain:13.4 nTPM
GTEx:15.9 nTPM
FANTOM5:105.3 Scaled Tags Per Million
Pig:25.6 nTPM
Mouse:10.1 nTPM
Allen mouse:1.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.4
Sample id Sample description nTPM
Hippocampus
nTPM: 12.0
1898 Male, age 80, left hemisphere 14.9
1855 Male, age 76, left hemisphere 13.1
1911 Female, age 85, right hemisphere 12.2
2621 Female, age 67, right hemisphere 12.2
2148 Female, age 91, left hemisphere 11.6
2529 Female, age 94, left hemisphere 7.9
Dentate gyrus
nTPM: 12.0
1927 Female, age 91, both hemispheres 16.5
2010 Male, age 76, both hemispheres 13.4
2246 Female, age 85, both hemispheres 12.7
2530 Female, age 94, left hemisphere 10.2
2528 Male, age 74, both hemispheres 9.9
2531 Female, age 67, both hemispheres 9.6
Entorhinal gyrus
nTPM: 11.3
1938 Female, age 85, left hemisphere 15.7
2117 Female, age 91, right hemisphere 11.7
1787 Male, age 76, left hemisphere 11.4
2764 Male, age 80, right hemisphere 10.6
2613 Female, age 94, left hemisphere 9.8
2686 Male, age 75, right hemisphere 8.9
Hippocampus, CA1
nTPM: 13.2
2749 Male, age 80, left hemisphere 17.8
1873 Female, age 85, both hemispheres 17.5
2045 Male, age 76, both hemispheres 13.1
2527 Male, age 74, both hemispheres 9.5
2082 Female, age 91, right hemisphere 8.4
Hippocampus, CA2
nTPM: 11.5
1892 Male, age 76, both hemispheres 16.5
2249 Male, age 74, both hemispheres 11.9
1963 Male, age 80, left hemisphere 11.8
1940 Female, age 85, left hemisphere 10.2
2113 Female, age 91, right hemisphere 9.2
2437 Female, age 94, left hemisphere 9.1
Hippocampus, CA3
nTPM: 12.7
1867 Male, age 76, both hemispheres 15.9
2137 Male, age 80, left hemisphere 15.3
1891 Female, age 85, both hemispheres 13.0
2436 Male, age 74, both hemispheres 11.4
2620 Female, age 94, left hemisphere 10.6
2861 Female, age 67, both hemispheres 10.1
Parahippocampal cortex
nTPM: 11.5
1933 Female, age 85, both hemispheres 14.2
1990 Female, age 91, right hemisphere 13.0
1850 Male, age 80, both hemispheres 12.7
2250 Female, age 67, right hemisphere 12.0
2245 Female, age 91, both hemispheres 11.9
2693 Female, age 94, both hemispheres 11.1
2018 Male, age 76, both hemispheres 10.6
2692 Male, age 74, both hemispheres 10.1
2532 Female, age 72, left hemisphere 10.0
2622 Female, age 67, right hemisphere 9.8
Perirhinal gyrus
nTPM: 13.4
1841 Female, age 85, right hemisphere 15.9
1847 Female, age 91, left hemisphere 13.7
1794 Male, age 80, right hemisphere 12.8
2521 Female, age 94, right hemisphere 12.4
2848 Male, age 76, right hemisphere 12.1
Subiculum
nTPM: 11.0
1977 Female, age 85, both hemispheres 12.8
2042 Male, age 76, both hemispheres 12.4
1901 Male, age 80, both hemispheres 12.1
2438 Female, age 94, left hemisphere 9.9
2729 Female, age 91, right hemisphere 9.7
2619 Male, age 74, both hemispheres 9.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.9
Samples: 197

Max nTPM: 29.5
Min nTPM: 10.2
Std nTPM: 3.0
Median nTPM: 15.6
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 29.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 24.7
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 24.6
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 24.1
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 23.8
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 23.0
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 22.2
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 21.6
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 21.3
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 21.1
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 20.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 105.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 105.3
FF:10169-103B7 60 years, female 120.4
FF:10153-102I9 76 years, female 90.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 25.6
Pig sample Sample description nTPM
Subiculum
nTPM: 25.7
Samples: 4

Max nTPM: 29.9
Min nTPM: 22.7
Sample A Female 29.9
Sample B Female 22.7
Sample C Male 25.4
Sample D Male 24.6
Dorsal hippocampus
nTPM: 25.4
Samples: 4

Max nTPM: 31.4
Min nTPM: 19.0
Sample A Female 31.4
Sample B Female 22.2
Sample C Male 29.1
Sample D Male 19.0
Entorhinal cortex
nTPM: 22.4
Samples: 4

Max nTPM: 24.1
Min nTPM: 18.8
Sample A Female 23.5
Sample B Female 23.3
Sample C Male 24.1
Sample D Male 18.8
Ventral hippocampus
nTPM: 23.4
Samples: 4

Max nTPM: 27.7
Min nTPM: 20.6
Sample A Female 27.7
Sample B Female 20.6
Sample C Male 23.1
Sample D Male 22.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 10.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 10.1
Samples: 4

Max nTPM: 12.3
Min nTPM: 9.0
Sample A Male 9.2
Sample B Male 12.3
Sample C Female 9.8
Sample D Female 9.0
Hippocampal formation
nTPM: 7.6
Samples: 4

Max nTPM: 8.4
Min nTPM: 6.5
Sample A Male 8.4
Sample B Male 8.3
Sample C Female 6.5
Sample D Female 7.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.5
68545923 Antisense, RP_050120_01_G02, Mouse strain C57BL/6J (56 days, male) 1.5

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