HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:57.9 nTPM
HPA Brain:65.6 nTPM
GTEx:57.9 nTPM
FANTOM5:100.5 Scaled Tags Per Million
Pig:9.9 nTPM
Mouse:27.5 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA021023Antibody HPA022124
Glial cells LowMedium
Neuronal cells Not detectedMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 65.6
Sample id Sample description nTPM
Hippocampus
nTPM: 62.6
2529 Female, age 94, left hemisphere 71.7
1898 Male, age 80, left hemisphere 64.2
1911 Female, age 85, right hemisphere 63.4
1855 Male, age 76, left hemisphere 63.0
2148 Female, age 91, left hemisphere 61.3
2621 Female, age 67, right hemisphere 51.5
Dentate gyrus
nTPM: 58.5
2530 Female, age 94, left hemisphere 65.7
2528 Male, age 74, both hemispheres 62.7
2246 Female, age 85, both hemispheres 61.3
2010 Male, age 76, both hemispheres 60.1
2531 Female, age 67, both hemispheres 54.7
1927 Female, age 91, both hemispheres 46.7
Entorhinal gyrus
nTPM: 59.1
2117 Female, age 91, right hemisphere 82.9
2686 Male, age 75, right hemisphere 64.5
2764 Male, age 80, right hemisphere 56.9
1938 Female, age 85, left hemisphere 51.7
1787 Male, age 76, left hemisphere 50.3
2613 Female, age 94, left hemisphere 48.3
Hippocampus, CA1
nTPM: 58.6
2082 Female, age 91, right hemisphere 70.5
2527 Male, age 74, both hemispheres 63.0
1873 Female, age 85, both hemispheres 58.3
2045 Male, age 76, both hemispheres 50.7
2749 Male, age 80, left hemisphere 50.5
Hippocampus, CA2
nTPM: 57.9
2113 Female, age 91, right hemisphere 68.3
1963 Male, age 80, left hemisphere 63.8
2249 Male, age 74, both hemispheres 61.3
1940 Female, age 85, left hemisphere 56.9
2437 Female, age 94, left hemisphere 52.3
1892 Male, age 76, both hemispheres 44.8
Hippocampus, CA3
nTPM: 50.0
1891 Female, age 85, both hemispheres 66.1
2620 Female, age 94, left hemisphere 53.2
1867 Male, age 76, both hemispheres 47.4
2861 Female, age 67, both hemispheres 45.1
2137 Male, age 80, left hemisphere 44.8
2436 Male, age 74, both hemispheres 43.4
Parahippocampal cortex
nTPM: 52.4
2692 Male, age 74, both hemispheres 68.3
2018 Male, age 76, both hemispheres 60.2
2532 Female, age 72, left hemisphere 56.6
1990 Female, age 91, right hemisphere 55.3
2245 Female, age 91, both hemispheres 54.1
2622 Female, age 67, right hemisphere 48.3
1850 Male, age 80, both hemispheres 47.8
1933 Female, age 85, both hemispheres 46.9
2693 Female, age 94, both hemispheres 46.2
2250 Female, age 67, right hemisphere 40.3
Perirhinal gyrus
nTPM: 45.8
2848 Male, age 76, right hemisphere 48.9
1794 Male, age 80, right hemisphere 45.8
2521 Female, age 94, right hemisphere 45.2
1847 Female, age 91, left hemisphere 44.8
1841 Female, age 85, right hemisphere 44.5
Subiculum
nTPM: 65.6
2729 Female, age 91, right hemisphere 79.9
2438 Female, age 94, left hemisphere 64.7
2619 Male, age 74, both hemispheres 64.1
2042 Male, age 76, both hemispheres 63.5
1901 Male, age 80, both hemispheres 62.9
1977 Female, age 85, both hemispheres 58.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 57.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 57.9
Samples: 197

Max nTPM: 202.0
Min nTPM: 13.1
Std nTPM: 23.8
Median nTPM: 52.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 202.0
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 160.2
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 135.0
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 129.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 113.1
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 110.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 106.2
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 105.9
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 105.6
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 103.0
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 96.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 100.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 100.5
FF:10153-102I9 76 years, female 110.6
FF:10169-103B7 60 years, female 90.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 9.9
Pig sample Sample description nTPM
Subiculum
nTPM: 9.1
Samples: 4

Max nTPM: 10.9
Min nTPM: 6.5
Sample A Female 10.9
Sample B Female 9.0
Sample C Male 9.8
Sample D Male 6.5
Dorsal hippocampus
nTPM: 8.8
Samples: 4

Max nTPM: 10.0
Min nTPM: 7.4
Sample A Female 10.0
Sample B Female 9.3
Sample C Male 8.5
Sample D Male 7.4
Entorhinal cortex
nTPM: 8.5
Samples: 4

Max nTPM: 9.4
Min nTPM: 6.7
Sample A Female 9.0
Sample B Female 9.4
Sample C Male 9.0
Sample D Male 6.7
Ventral hippocampus
nTPM: 9.9
Samples: 4

Max nTPM: 13.2
Min nTPM: 6.9
Sample A Female 10.7
Sample B Female 8.8
Sample C Male 13.2
Sample D Male 6.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 27.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 27.5
Samples: 4

Max nTPM: 28.2
Min nTPM: 26.5
Sample A Male 27.9
Sample B Male 27.3
Sample C Female 28.2
Sample D Female 26.5
Hippocampal formation
nTPM: 26.5
Samples: 4

Max nTPM: 27.3
Min nTPM: 25.9
Sample A Male 27.3
Sample B Male 25.9
Sample C Female 26.7
Sample D Female 26.1

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