HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:58.7 nTPM
HPA Brain:11.4 nTPM
GTEx:58.7 nTPM
FANTOM5:11.9 Scaled Tags Per Million
Pig:28.7 nTPM
Mouse:65.7 nTPM
Allen mouse:5.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB033946
Glial cells Not detected
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 11.4
Sample id Sample description nTPM
Hippocampus
nTPM: 10.5
1898 Male, age 80, left hemisphere 12.6
2529 Female, age 94, left hemisphere 12.5
2148 Female, age 91, left hemisphere 10.0
1855 Male, age 76, left hemisphere 9.8
2621 Female, age 67, right hemisphere 9.2
1911 Female, age 85, right hemisphere 8.8
Dentate gyrus
nTPM: 9.8
2530 Female, age 94, left hemisphere 12.3
2010 Male, age 76, both hemispheres 11.0
2528 Male, age 74, both hemispheres 10.4
1927 Female, age 91, both hemispheres 10.0
2531 Female, age 67, both hemispheres 7.8
2246 Female, age 85, both hemispheres 7.5
Entorhinal gyrus
nTPM: 10.4
2117 Female, age 91, right hemisphere 11.3
1938 Female, age 85, left hemisphere 10.9
2764 Male, age 80, right hemisphere 10.8
2686 Male, age 75, right hemisphere 10.5
1787 Male, age 76, left hemisphere 9.4
2613 Female, age 94, left hemisphere 9.3
Hippocampus, CA1
nTPM: 10.4
2749 Male, age 80, left hemisphere 14.1
1873 Female, age 85, both hemispheres 10.2
2527 Male, age 74, both hemispheres 9.9
2082 Female, age 91, right hemisphere 9.5
2045 Male, age 76, both hemispheres 8.5
Hippocampus, CA2
nTPM: 11.4
1963 Male, age 80, left hemisphere 15.1
2249 Male, age 74, both hemispheres 12.0
2437 Female, age 94, left hemisphere 10.7
1892 Male, age 76, both hemispheres 10.3
1940 Female, age 85, left hemisphere 10.2
2113 Female, age 91, right hemisphere 10.1
Hippocampus, CA3
nTPM: 10.3
2436 Male, age 74, both hemispheres 12.7
1867 Male, age 76, both hemispheres 11.0
2137 Male, age 80, left hemisphere 10.9
2861 Female, age 67, both hemispheres 10.4
1891 Female, age 85, both hemispheres 10.2
2620 Female, age 94, left hemisphere 6.8
Parahippocampal cortex
nTPM: 9.6
1933 Female, age 85, both hemispheres 10.9
2018 Male, age 76, both hemispheres 10.9
1850 Male, age 80, both hemispheres 10.5
1990 Female, age 91, right hemisphere 10.1
2250 Female, age 67, right hemisphere 9.9
2532 Female, age 72, left hemisphere 9.0
2622 Female, age 67, right hemisphere 9.0
2693 Female, age 94, both hemispheres 9.0
2692 Male, age 74, both hemispheres 8.4
2245 Female, age 91, both hemispheres 8.1
Perirhinal gyrus
nTPM: 9.8
1794 Male, age 80, right hemisphere 10.9
1841 Female, age 85, right hemisphere 10.7
1847 Female, age 91, left hemisphere 10.4
2521 Female, age 94, right hemisphere 8.6
2848 Male, age 76, right hemisphere 8.2
Subiculum
nTPM: 10.0
1901 Male, age 80, both hemispheres 11.5
1977 Female, age 85, both hemispheres 11.3
2729 Female, age 91, right hemisphere 10.6
2042 Male, age 76, both hemispheres 10.4
2619 Male, age 74, both hemispheres 8.2
2438 Female, age 94, left hemisphere 8.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 58.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 58.7
Samples: 197

Max nTPM: 147.2
Min nTPM: 27.0
Std nTPM: 20.2
Median nTPM: 54.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 147.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 129.7
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 125.7
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 112.1
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 111.4
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 106.9
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 106.4
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 98.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 97.7
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 94.9
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 94.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 11.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 11.9
FF:10169-103B7 60 years, female 13.5
FF:10153-102I9 76 years, female 10.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 28.7
Pig sample Sample description nTPM
Subiculum
nTPM: 23.7
Samples: 4

Max nTPM: 27.9
Min nTPM: 21.0
Sample A Female 23.9
Sample B Female 27.9
Sample C Male 21.0
Sample D Male 21.9
Dorsal hippocampus
nTPM: 27.0
Samples: 4

Max nTPM: 30.4
Min nTPM: 19.3
Sample A Female 28.5
Sample B Female 30.4
Sample C Male 29.9
Sample D Male 19.3
Entorhinal cortex
nTPM: 28.7
Samples: 4

Max nTPM: 42.6
Min nTPM: 19.8
Sample A Female 19.8
Sample B Female 42.6
Sample C Male 30.5
Sample D Male 21.9
Ventral hippocampus
nTPM: 24.8
Samples: 4

Max nTPM: 30.9
Min nTPM: 19.5
Sample A Female 19.5
Sample B Female 23.7
Sample C Male 30.9
Sample D Male 25.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 65.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 65.7
Samples: 4

Max nTPM: 73.0
Min nTPM: 61.6
Sample A Male 61.6
Sample B Male 73.0
Sample C Female 64.3
Sample D Female 63.7
Hippocampal formation
nTPM: 63.8
Samples: 4

Max nTPM: 72.6
Min nTPM: 54.7
Sample A Male 72.6
Sample B Male 68.6
Sample C Female 59.2
Sample D Female 54.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.5
69080040 Antisense, RP_050324_01_F03, Mouse strain C57BL/6J (56 days, male) 5.5

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