HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:29.5 nTPM
HPA Brain:7.5 nTPM
GTEx:29.5 nTPM
FANTOM5:21.6 Scaled Tags Per Million
Pig:18.8 nTPM
Mouse:23.0 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044340Antibody HPA059710
Glial cells Not detectedNot detected
Neuronal cells LowNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 7.5
Sample id Sample description nTPM
Hippocampus
nTPM: 6.9
2529 Female, age 94, left hemisphere 8.1
2621 Female, age 67, right hemisphere 7.7
1898 Male, age 80, left hemisphere 7.4
2148 Female, age 91, left hemisphere 6.4
1911 Female, age 85, right hemisphere 6.2
1855 Male, age 76, left hemisphere 6.0
Dentate gyrus
nTPM: 7.2
2531 Female, age 67, both hemispheres 8.4
2530 Female, age 94, left hemisphere 8.1
1927 Female, age 91, both hemispheres 7.0
2010 Male, age 76, both hemispheres 6.7
2528 Male, age 74, both hemispheres 6.6
2246 Female, age 85, both hemispheres 6.5
Entorhinal gyrus
nTPM: 7.0
2764 Male, age 80, right hemisphere 7.9
2117 Female, age 91, right hemisphere 7.1
1938 Female, age 85, left hemisphere 7.0
2613 Female, age 94, left hemisphere 6.8
2686 Male, age 75, right hemisphere 6.7
1787 Male, age 76, left hemisphere 6.5
Hippocampus, CA1
nTPM: 6.9
2749 Male, age 80, left hemisphere 9.1
1873 Female, age 85, both hemispheres 6.9
2082 Female, age 91, right hemisphere 6.4
2527 Male, age 74, both hemispheres 6.4
2045 Male, age 76, both hemispheres 5.5
Hippocampus, CA2
nTPM: 6.9
1892 Male, age 76, both hemispheres 8.9
1963 Male, age 80, left hemisphere 6.8
2437 Female, age 94, left hemisphere 6.8
2113 Female, age 91, right hemisphere 6.5
2249 Male, age 74, both hemispheres 6.4
1940 Female, age 85, left hemisphere 5.6
Hippocampus, CA3
nTPM: 7.2
1867 Male, age 76, both hemispheres 8.1
2137 Male, age 80, left hemisphere 7.9
2620 Female, age 94, left hemisphere 7.6
2436 Male, age 74, both hemispheres 7.2
2861 Female, age 67, both hemispheres 6.5
1891 Female, age 85, both hemispheres 6.0
Parahippocampal cortex
nTPM: 7.4
2245 Female, age 91, both hemispheres 9.2
2622 Female, age 67, right hemisphere 8.4
2532 Female, age 72, left hemisphere 8.3
1850 Male, age 80, both hemispheres 7.9
1933 Female, age 85, both hemispheres 7.6
2018 Male, age 76, both hemispheres 7.3
1990 Female, age 91, right hemisphere 6.7
2250 Female, age 67, right hemisphere 6.3
2692 Male, age 74, both hemispheres 6.2
2693 Female, age 94, both hemispheres 6.0
Perirhinal gyrus
nTPM: 7.5
1794 Male, age 80, right hemisphere 8.1
1847 Female, age 91, left hemisphere 7.6
1841 Female, age 85, right hemisphere 7.3
2521 Female, age 94, right hemisphere 7.2
2848 Male, age 76, right hemisphere 7.1
Subiculum
nTPM: 7.0
2438 Female, age 94, left hemisphere 9.2
1977 Female, age 85, both hemispheres 7.3
2619 Male, age 74, both hemispheres 7.3
1901 Male, age 80, both hemispheres 7.0
2042 Male, age 76, both hemispheres 6.2
2729 Female, age 91, right hemisphere 4.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 29.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 29.5
Samples: 197

Max nTPM: 70.4
Min nTPM: 8.5
Std nTPM: 8.8
Median nTPM: 28.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 70.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 53.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 52.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 52.1
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 49.9
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 49.8
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 48.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 48.3
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 47.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 47.7
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 47.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 21.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 21.6
FF:10169-103B7 60 years, female 21.8
FF:10153-102I9 76 years, female 21.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.8
Pig sample Sample description nTPM
Subiculum
nTPM: 13.3
Samples: 4

Max nTPM: 21.8
Min nTPM: 8.2
Sample A Female 21.8
Sample B Female 10.3
Sample C Male 13.0
Sample D Male 8.2
Dorsal hippocampus
nTPM: 18.8
Samples: 4

Max nTPM: 24.6
Min nTPM: 14.7
Sample A Female 24.6
Sample B Female 19.1
Sample C Male 16.8
Sample D Male 14.7
Entorhinal cortex
nTPM: 14.6
Samples: 4

Max nTPM: 17.5
Min nTPM: 9.7
Sample A Female 16.5
Sample B Female 14.6
Sample C Male 17.5
Sample D Male 9.7
Ventral hippocampus
nTPM: 16.4
Samples: 4

Max nTPM: 19.8
Min nTPM: 10.6
Sample A Female 19.8
Sample B Female 10.6
Sample C Male 19.2
Sample D Male 15.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 23.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 22.5
Samples: 4

Max nTPM: 25.3
Min nTPM: 17.8
Sample A Male 23.5
Sample B Male 23.3
Sample C Female 25.3
Sample D Female 17.8
Hippocampal formation
nTPM: 23.0
Samples: 4

Max nTPM: 24.4
Min nTPM: 20.3
Sample A Male 23.7
Sample B Male 24.4
Sample C Female 23.7
Sample D Female 20.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
71764583 Antisense, RP_050926_01_D10, Mouse strain C57BL/6J (56 days, male) 0.5

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