HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:47.9 nTPM
HPA Brain:28.5 nTPM
GTEx:47.9 nTPM
FANTOM5:27.3 Scaled Tags Per Million
Pig:47.1 nTPM
Mouse:9.0 nTPM
Allen mouse:0.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA045268
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 28.5
Sample id Sample description nTPM
Hippocampus
nTPM: 27.6
1898 Male, age 80, left hemisphere 32.7
2529 Female, age 94, left hemisphere 29.2
1911 Female, age 85, right hemisphere 26.8
2148 Female, age 91, left hemisphere 26.4
2621 Female, age 67, right hemisphere 25.6
1855 Male, age 76, left hemisphere 24.9
Dentate gyrus
nTPM: 26.9
2530 Female, age 94, left hemisphere 38.5
2528 Male, age 74, both hemispheres 27.8
2010 Male, age 76, both hemispheres 27.5
2246 Female, age 85, both hemispheres 26.0
1927 Female, age 91, both hemispheres 21.0
2531 Female, age 67, both hemispheres 20.4
Entorhinal gyrus
nTPM: 28.5
2117 Female, age 91, right hemisphere 33.9
1787 Male, age 76, left hemisphere 30.8
2764 Male, age 80, right hemisphere 30.3
2613 Female, age 94, left hemisphere 29.6
1938 Female, age 85, left hemisphere 24.8
2686 Male, age 75, right hemisphere 21.6
Hippocampus, CA1
nTPM: 26.4
2749 Male, age 80, left hemisphere 28.1
2527 Male, age 74, both hemispheres 27.9
2082 Female, age 91, right hemisphere 27.3
1873 Female, age 85, both hemispheres 27.2
2045 Male, age 76, both hemispheres 21.2
Hippocampus, CA2
nTPM: 27.4
1963 Male, age 80, left hemisphere 31.0
2249 Male, age 74, both hemispheres 29.0
2437 Female, age 94, left hemisphere 28.1
1892 Male, age 76, both hemispheres 27.7
2113 Female, age 91, right hemisphere 24.6
1940 Female, age 85, left hemisphere 23.8
Hippocampus, CA3
nTPM: 24.5
2861 Female, age 67, both hemispheres 28.6
2137 Male, age 80, left hemisphere 25.1
2436 Male, age 74, both hemispheres 24.7
1891 Female, age 85, both hemispheres 23.8
1867 Male, age 76, both hemispheres 23.6
2620 Female, age 94, left hemisphere 21.2
Parahippocampal cortex
nTPM: 22.8
2245 Female, age 91, both hemispheres 27.5
2532 Female, age 72, left hemisphere 26.2
2018 Male, age 76, both hemispheres 25.5
2250 Female, age 67, right hemisphere 24.3
1933 Female, age 85, both hemispheres 23.6
1990 Female, age 91, right hemisphere 22.5
2622 Female, age 67, right hemisphere 22.3
2692 Male, age 74, both hemispheres 19.7
1850 Male, age 80, both hemispheres 19.0
2693 Female, age 94, both hemispheres 17.2
Perirhinal gyrus
nTPM: 20.3
1847 Female, age 91, left hemisphere 22.4
1841 Female, age 85, right hemisphere 20.8
1794 Male, age 80, right hemisphere 20.4
2521 Female, age 94, right hemisphere 19.6
2848 Male, age 76, right hemisphere 18.1
Subiculum
nTPM: 26.6
2042 Male, age 76, both hemispheres 30.3
1977 Female, age 85, both hemispheres 30.1
2619 Male, age 74, both hemispheres 29.1
2729 Female, age 91, right hemisphere 26.3
1901 Male, age 80, both hemispheres 25.9
2438 Female, age 94, left hemisphere 17.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 47.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 47.9
Samples: 197

Max nTPM: 95.6
Min nTPM: 12.1
Std nTPM: 13.9
Median nTPM: 46.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 95.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 83.6
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 82.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 81.7
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 81.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 78.5
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 73.6
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 72.3
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 70.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 69.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 68.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 27.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 27.3
FF:10153-102I9 76 years, female 31.9
FF:10169-103B7 60 years, female 22.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 47.1
Pig sample Sample description nTPM
Subiculum
nTPM: 47.1
Samples: 4

Max nTPM: 67.7
Min nTPM: 38.3
Sample A Female 67.7
Sample B Female 38.3
Sample C Male 41.0
Sample D Male 41.4
Dorsal hippocampus
nTPM: 43.7
Samples: 4

Max nTPM: 59.4
Min nTPM: 33.1
Sample A Female 59.4
Sample B Female 35.8
Sample C Male 46.5
Sample D Male 33.1
Entorhinal cortex
nTPM: 40.4
Samples: 4

Max nTPM: 48.2
Min nTPM: 37.5
Sample A Female 38.1
Sample B Female 37.6
Sample C Male 48.2
Sample D Male 37.5
Ventral hippocampus
nTPM: 43.7
Samples: 4

Max nTPM: 50.9
Min nTPM: 29.3
Sample A Female 47.7
Sample B Female 29.3
Sample C Male 50.9
Sample D Male 46.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 9.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.0
Samples: 4

Max nTPM: 9.9
Min nTPM: 8.2
Sample A Male 9.9
Sample B Male 8.2
Sample C Female 9.6
Sample D Female 8.2
Hippocampal formation
nTPM: 8.0
Samples: 4

Max nTPM: 9.8
Min nTPM: 6.6
Sample A Male 7.0
Sample B Male 6.6
Sample C Female 8.5
Sample D Female 9.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.9
77923129 Antisense, RP_070219_01_C10, Mouse strain C57BL/6J (56 days, male) 0.9

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