HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:7.4 nTPM
HPA Brain:39.9 nTPM
GTEx:7.4 nTPM
FANTOM5:39.6 Scaled Tags Per Million
Pig:13.7 nTPM
Mouse:17.6 nTPM
Allen mouse:3.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA005684
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 39.9
Sample id Sample description nTPM
Hippocampus
nTPM: 34.6
2148 Female, age 91, left hemisphere 39.7
2621 Female, age 67, right hemisphere 35.5
2529 Female, age 94, left hemisphere 35.4
1855 Male, age 76, left hemisphere 33.2
1898 Male, age 80, left hemisphere 33.1
1911 Female, age 85, right hemisphere 30.9
Dentate gyrus
nTPM: 35.9
2531 Female, age 67, both hemispheres 41.5
2246 Female, age 85, both hemispheres 37.3
2528 Male, age 74, both hemispheres 36.4
2530 Female, age 94, left hemisphere 34.4
1927 Female, age 91, both hemispheres 34.3
2010 Male, age 76, both hemispheres 31.6
Entorhinal gyrus
nTPM: 39.9
2764 Male, age 80, right hemisphere 44.3
2613 Female, age 94, left hemisphere 43.4
1938 Female, age 85, left hemisphere 39.1
2686 Male, age 75, right hemisphere 38.0
2117 Female, age 91, right hemisphere 37.3
1787 Male, age 76, left hemisphere 37.2
Hippocampus, CA1
nTPM: 34.6
2082 Female, age 91, right hemisphere 36.9
2527 Male, age 74, both hemispheres 35.2
2749 Male, age 80, left hemisphere 34.6
1873 Female, age 85, both hemispheres 34.0
2045 Male, age 76, both hemispheres 32.1
Hippocampus, CA2
nTPM: 35.1
1940 Female, age 85, left hemisphere 39.5
2437 Female, age 94, left hemisphere 37.0
2113 Female, age 91, right hemisphere 36.9
2249 Male, age 74, both hemispheres 33.9
1963 Male, age 80, left hemisphere 32.3
1892 Male, age 76, both hemispheres 31.1
Hippocampus, CA3
nTPM: 37.9
2620 Female, age 94, left hemisphere 47.0
2436 Male, age 74, both hemispheres 41.7
2861 Female, age 67, both hemispheres 40.6
2137 Male, age 80, left hemisphere 33.8
1891 Female, age 85, both hemispheres 32.7
1867 Male, age 76, both hemispheres 31.8
Parahippocampal cortex
nTPM: 37.9
2532 Female, age 72, left hemisphere 44.6
2622 Female, age 67, right hemisphere 41.3
2245 Female, age 91, both hemispheres 39.4
2693 Female, age 94, both hemispheres 38.6
1990 Female, age 91, right hemisphere 37.4
1850 Male, age 80, both hemispheres 37.3
2692 Male, age 74, both hemispheres 36.4
1933 Female, age 85, both hemispheres 36.3
2250 Female, age 67, right hemisphere 35.0
2018 Male, age 76, both hemispheres 32.3
Perirhinal gyrus
nTPM: 39.9
2521 Female, age 94, right hemisphere 42.6
1794 Male, age 80, right hemisphere 41.6
1841 Female, age 85, right hemisphere 40.1
1847 Female, age 91, left hemisphere 38.7
2848 Male, age 76, right hemisphere 36.4
Subiculum
nTPM: 35.0
1977 Female, age 85, both hemispheres 38.0
2619 Male, age 74, both hemispheres 36.5
2438 Female, age 94, left hemisphere 34.9
2729 Female, age 91, right hemisphere 34.6
2042 Male, age 76, both hemispheres 33.0
1901 Male, age 80, both hemispheres 32.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 7.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 7.4
Samples: 197

Max nTPM: 14.7
Min nTPM: 2.6
Std nTPM: 2.1
Median nTPM: 7.1
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 14.7
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 14.2
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 13.2
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 12.8
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 12.4
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 11.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 11.7
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 11.6
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 11.5
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 11.5
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 11.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 39.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 39.6
FF:10169-103B7 60 years, female 43.6
FF:10153-102I9 76 years, female 35.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 13.7
Pig sample Sample description nTPM
Subiculum
nTPM: 12.1
Samples: 4

Max nTPM: 15.8
Min nTPM: 10.3
Sample A Female 15.8
Sample B Female 10.6
Sample C Male 11.6
Sample D Male 10.3
Dorsal hippocampus
nTPM: 12.8
Samples: 4

Max nTPM: 15.4
Min nTPM: 10.5
Sample A Female 15.4
Sample B Female 14.1
Sample C Male 11.3
Sample D Male 10.5
Entorhinal cortex
nTPM: 13.2
Samples: 4

Max nTPM: 14.3
Min nTPM: 12.1
Sample A Female 14.3
Sample B Female 12.1
Sample C Male 14.2
Sample D Male 12.2
Ventral hippocampus
nTPM: 13.7
Samples: 4

Max nTPM: 16.7
Min nTPM: 10.8
Sample A Female 12.8
Sample B Female 10.8
Sample C Male 16.7
Sample D Male 14.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 17.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.6
Samples: 4

Max nTPM: 20.7
Min nTPM: 14.6
Sample A Male 19.2
Sample B Male 14.6
Sample C Female 16.0
Sample D Female 20.7
Hippocampal formation
nTPM: 17.2
Samples: 4

Max nTPM: 21.0
Min nTPM: 13.8
Sample A Male 13.8
Sample B Male 18.7
Sample C Female 21.0
Sample D Female 15.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.1
71613641 Antisense, RP_050927_02_E02, Mouse strain C57BL/6J (56 days, male) 4.6
73949638 Antisense, RP_051219_02_A07, Mouse strain C57BL/6J (56 days, male) 1.7

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