HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:27.3 nTPM
HPA Brain:18.7 nTPM
GTEx:27.3 nTPM
FANTOM5:71.4 Scaled Tags Per Million
Pig:61.8 nTPM
Mouse:106.2 nTPM
Allen mouse:14.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036584
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 18.7
Sample id Sample description nTPM
Hippocampus
nTPM: 16.1
1898 Male, age 80, left hemisphere 20.6
1911 Female, age 85, right hemisphere 17.6
1855 Male, age 76, left hemisphere 17.2
2529 Female, age 94, left hemisphere 14.5
2621 Female, age 67, right hemisphere 14.2
2148 Female, age 91, left hemisphere 12.6
Dentate gyrus
nTPM: 15.0
2010 Male, age 76, both hemispheres 18.4
1927 Female, age 91, both hemispheres 18.2
2528 Male, age 74, both hemispheres 14.8
2246 Female, age 85, both hemispheres 13.8
2530 Female, age 94, left hemisphere 13.4
2531 Female, age 67, both hemispheres 11.5
Entorhinal gyrus
nTPM: 13.6
1938 Female, age 85, left hemisphere 16.7
2117 Female, age 91, right hemisphere 15.1
1787 Male, age 76, left hemisphere 14.2
2764 Male, age 80, right hemisphere 13.9
2613 Female, age 94, left hemisphere 11.6
2686 Male, age 75, right hemisphere 10.3
Hippocampus, CA1
nTPM: 18.7
2749 Male, age 80, left hemisphere 25.3
1873 Female, age 85, both hemispheres 19.4
2045 Male, age 76, both hemispheres 17.5
2082 Female, age 91, right hemisphere 15.6
2527 Male, age 74, both hemispheres 15.6
Hippocampus, CA2
nTPM: 16.2
1892 Male, age 76, both hemispheres 20.7
2249 Male, age 74, both hemispheres 19.7
1963 Male, age 80, left hemisphere 19.3
2113 Female, age 91, right hemisphere 13.0
1940 Female, age 85, left hemisphere 12.4
2437 Female, age 94, left hemisphere 11.8
Hippocampus, CA3
nTPM: 15.4
1867 Male, age 76, both hemispheres 19.1
1891 Female, age 85, both hemispheres 18.2
2137 Male, age 80, left hemisphere 17.9
2436 Male, age 74, both hemispheres 17.0
2620 Female, age 94, left hemisphere 11.0
2861 Female, age 67, both hemispheres 9.2
Parahippocampal cortex
nTPM: 13.1
2018 Male, age 76, both hemispheres 15.7
1850 Male, age 80, both hemispheres 14.9
1990 Female, age 91, right hemisphere 14.6
2693 Female, age 94, both hemispheres 14.0
2250 Female, age 67, right hemisphere 13.7
1933 Female, age 85, both hemispheres 13.6
2532 Female, age 72, left hemisphere 13.5
2692 Male, age 74, both hemispheres 12.2
2245 Female, age 91, both hemispheres 10.9
2622 Female, age 67, right hemisphere 7.9
Perirhinal gyrus
nTPM: 15.6
1847 Female, age 91, left hemisphere 18.6
1794 Male, age 80, right hemisphere 16.6
1841 Female, age 85, right hemisphere 15.5
2521 Female, age 94, right hemisphere 15.2
2848 Male, age 76, right hemisphere 11.9
Subiculum
nTPM: 15.9
2438 Female, age 94, left hemisphere 19.9
1977 Female, age 85, both hemispheres 17.3
1901 Male, age 80, both hemispheres 16.7
2042 Male, age 76, both hemispheres 15.8
2619 Male, age 74, both hemispheres 14.0
2729 Female, age 91, right hemisphere 11.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 27.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 27.3
Samples: 197

Max nTPM: 52.5
Min nTPM: 11.6
Std nTPM: 6.5
Median nTPM: 27.0
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 52.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 51.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 44.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 43.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 43.0
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 40.8
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 40.4
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 39.3
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 39.3
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 37.8
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 37.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 71.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 71.4
FF:10169-103B7 60 years, female 87.2
FF:10153-102I9 76 years, female 55.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 61.8
Pig sample Sample description nTPM
Subiculum
nTPM: 49.3
Samples: 4

Max nTPM: 59.5
Min nTPM: 42.0
Sample A Female 59.5
Sample B Female 49.6
Sample C Male 42.0
Sample D Male 46.1
Dorsal hippocampus
nTPM: 61.9
Samples: 4

Max nTPM: 71.5
Min nTPM: 55.8
Sample A Female 71.5
Sample B Female 55.8
Sample C Male 61.1
Sample D Male 59.0
Entorhinal cortex
nTPM: 46.4
Samples: 4

Max nTPM: 49.9
Min nTPM: 42.5
Sample A Female 49.9
Sample B Female 49.0
Sample C Male 44.3
Sample D Male 42.5
Ventral hippocampus
nTPM: 51.6
Samples: 4

Max nTPM: 58.2
Min nTPM: 46.2
Sample A Female 52.8
Sample B Female 49.2
Sample C Male 46.2
Sample D Male 58.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 106.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 95.2
Samples: 4

Max nTPM: 102.9
Min nTPM: 88.7
Sample A Male 88.7
Sample B Male 100.4
Sample C Female 102.9
Sample D Female 88.9
Hippocampal formation
nTPM: 106.3
Samples: 4

Max nTPM: 115.0
Min nTPM: 98.1
Sample A Male 115.0
Sample B Male 98.1
Sample C Female 105.1
Sample D Female 106.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.1
69262340 Antisense, RP_050303_02_B10, Mouse strain C57BL/6J (56 days, male) 14.1

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